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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7471070   uncharacterized LOC7471070 
 gma-u.5   100802319   uncharacterized LOC100802319 
 mtr-u.5   11410157   uncharacterized LOC11410157 
 ath-u.5   AT1G26330   DNA binding protein 
 vvi-u.5   104882754   uncharacterized LOC104882754 
 vvi-u.5   104880625   uncharacterized LOC104880625 
 vvi-u.5   100268093   uncharacterized LOC100268093 
 sly-u.5   101261411   uncharacterized LOC101261411 
 osa-u.5   4346367   uncharacterized LOC4346367 
 zma-u.5   103647245   DNA binding 

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Top 50 coexpressed genes to 7471070 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7471070 (ppo-m.4 coexpression data)

CoexMap"7471070"


ppoLOC7471070 | Entrez gene ID : 7471070    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 1 1 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051726 [list] [network] regulation of cell cycle  (120 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024462339.1 [sequence] [blastp]
XP_024462340.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 2,  E.R. 2,  cyto 1,  mito 1,  plas 1,  extr 1,  mito_plas 1,  cyto_plas 1  (predict for XP_024462339.1)
nucl 4,  chlo 2,  cysk_nucl 2,  E.R. 1,  chlo_mito 1  (predict for XP_024462340.1)
Subcellular
localization
TargetP
other 9  (predict for XP_024462339.1)
other 6  (predict for XP_024462340.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7471070

.
gma-u.5
for
100802319

.
mtr-u.5
for
11410157

.
ath-u.5
for
AT1G26330

.
vvi-u.5
for
104882754

.
vvi-u.5
for
104880625

.
vvi-u.5
for
100268093

.
sly-u.5
for
101261411

.
osa-u.5
for
4346367

.
zma-u.5
for
103647245

.


Ortholog ID: 9802
Species ath gma sly osa zma bra vvi vvi mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G26330 LOC100802319 LOC101261411 LOC4346367 LOC103647245 LOC103840608 LOC100268093 LOC104882754 LOC11410157 LOC123111445 LOC123111446 LOC123400171 LOC107934738 LOC107946360 LOC106397700 LOC106398786 LOC8062589 LOC102605079 LOC102628159 LOC100827244 LOC107814422 LOC107765350
Function* DNA binding protein uncharacterized LOC100802319 uncharacterized LOC101261411 uncharacterized LOC4346367 DNA binding uncharacterized LOC103840608 uncharacterized LOC100268093 uncharacterized LOC104882754 uncharacterized LOC11410157 uncharacterized LOC123111445 uncharacterized LOC123111446 uncharacterized LOC123400171 uncharacterized LOC107934738 uncharacterized LOC107946360 uncharacterized LOC106397700 uncharacterized LOC106398786 uncharacterized LOC8062589 uncharacterized LOC102605079 uncharacterized LOC102628159 uncharacterized LOC100827244 uncharacterized LOC107814422 uncharacterized LOC107765350
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 8
ath03460 Fanconi anemia pathway 3
ath03440 Homologous recombination 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 5
gma03030 DNA replication 5
gma03420 Nucleotide excision repair 4
gma03430 Mismatch repair 4
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03430 Mismatch repair 4
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 2
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 5
zma00270 Cysteine and methionine metabolism 3
zma03440 Homologous recombination 3
zma03460 Fanconi anemia pathway 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
mtr03420 Nucleotide excision repair 2
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna03460 Fanconi anemia pathway 4
bna03030 DNA replication 3
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna03460 Fanconi anemia pathway 4
bna03030 DNA replication 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 7
sot03460 Fanconi anemia pathway 5
sot03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03440 Homologous recombination 3
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 3
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 7
nta01232 Nucleotide metabolism 7
nta00230 Purine metabolism 5
nta00480 Glutathione metabolism 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839175 100802319 101261411 4346367 103647245 103840608 100268093 104882754 11410157 123111445 123111446 123400171 107934738 107946360 106397700 106398786 8062589 102605079 102628159 100827244 107814422 107765350
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