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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7471616   polygalacturonase QRT3 
 gma-u.5   100800278   polygalacturonase QRT3 
 gma-u.5   100779820   polygalacturonase QRT3 
 mtr-u.5   11440180   polygalacturonase QRT3 
 ghi-r.1   107927669   polygalacturonase QRT3 
 ghi-r.1   107945292   polygalacturonase QRT3 
 bna-r.1   106440405   polygalacturonase QRT3-like 
 cit-r.1   102625404   polygalacturonase QRT3 
 nta-r.1   107820425   polygalacturonase QRT3 

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Top 50 coexpressed genes to 7471616 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7471616 (ppo-m.4 coexpression data)

CoexMap"7471616"


ppoLOC7471616 | Entrez gene ID : 7471616    
Species ppo gma mtr ghi bna cit nta sbi osa sot sly bra tae ath hvu vvi zma cre bdi
Paralog 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (77 genes)  IEA  
Protein XP_002304267.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  extr 2,  cyto 1,  nucl 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_002304267.4)
Subcellular
localization
TargetP
scret 8  (predict for XP_002304267.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7471616
gma-u.5
for
100800278
gma-u.5
for
100779820
mtr-u.5
for
11440180
ghi-r.1
for
107927669
ghi-r.1
for
107945292
bna-r.1
for
106440405
cit-r.1
for
102625404
nta-r.1
for
107820425


Ortholog ID: 10871
Species gma gma mtr ghi ghi bna bna cit nta
Symbol LOC100800278 LOC100779820 LOC11440180 LOC107927669 LOC107945292 LOC106421049 LOC125596568 LOC102625404 LOC107820425
Function* polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3 polygalacturonase QRT3-like polygalacturonase QRT3-like polygalacturonase QRT3 polygalacturonase QRT3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00062 Fatty acid elongation 3
gma01040 Biosynthesis of unsaturated fatty acids 3
gma01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00330 Arginine and proline metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100800278 100779820 11440180 107927669 107945292 106421049 125596568 102625404 107820425
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