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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7471662   RING-box protein 1a 
 ppo-r.4   7471662   RING-box protein 1a 
 ppo-m.4   7471662   RING-box protein 1a 
 ppo-u.5   18100330   RING-box protein 1a 
 ppo-u.5   18094715   RING-box protein 1a 
 gma-u.5   100798515   RING-box protein 1a 
 gma-u.5   100789570   RING-box protein 1a 
 gma-u.5   100526919   uncharacterized LOC100526919 
 mtr-u.5   11413962   RING-box protein 1a 
 mtr-u.5   25492127   RING-box protein 1a 
 ath-u.5   RBX1   RING-box 1 
 vvi-u.5   100259489   RING-box protein 1a 
 vvi-u.5   100246271   RING-box protein 1a 
 sly-u.5   101249890   RING-box protein 1a 
 sly-u.5   101259644   uncharacterized LOC101259644 
 osa-u.5   4326152   RING-box protein 1a 
 osa-u.5   4330476   uncharacterized LOC4330476 
 zma-u.5   103634739   RING-box protein 1-like 
 zma-u.5   103649912   RING-box protein 1a 
 zma-u.5   100192928   uncharacterized LOC100192928 

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Top 50 coexpressed genes to 7471662 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7471662 (ppo-u.5 coexpression data)

CoexMap"7471662"


ppoLOC7471662 | Entrez gene ID : 7471662    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 2 1 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03420 [list] [network] Nucleotide excision repair (89 genes)
pop04120 [list] [network] Ubiquitin mediated proteolysis (184 genes)
pop04141 [list] [network] Protein processing in endoplasmic reticulum (286 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (340 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO:0031461 [list] [network] cullin-RING ubiquitin ligase complex  (129 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0097602 [list] [network] cullin family protein binding  (25 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (225 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
Protein XP_002304312.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_002304312.3)
Subcellular
localization
TargetP
other 8  (predict for XP_002304312.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7471662

.
ppo-r.4
for
7471662

.
ppo-m.4
for
7471662

.
ppo-u.5
for
18100330

.
ppo-u.5
for
18094715

.
gma-u.5
for
100798515

.
gma-u.5
for
100789570

.
gma-u.5
for
100526919

.
mtr-u.5
for
11413962

.
mtr-u.5
for
25492127

.
ath-u.5
for
RBX1

.
vvi-u.5
for
100259489

.
vvi-u.5
for
100246271

.
sly-u.5
for
101249890

.
sly-u.5
for
101259644

.
osa-u.5
for
4326152

.
osa-u.5
for
4330476

.
zma-u.5
for
103634739

.
zma-u.5
for
103649912

.
zma-u.5
for
100192928

.


Ortholog ID: 2561
Species ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol RBX1 LOC100798515 LOC100789570 LOC101249890 LOC101259644 LOC4326152 LOC4330476 LOC103634739 LOC103649912 LOC103856451 LOC100259489 LOC100246271 LOC7471662 LOC18100330 LOC25492127 LOC11413962 LOC123145238 LOC123128144 LOC123442346 LOC123402745 LOC107932188 LOC121204775 LOC106385158 LOC106408993 CHLRE_12g543450v5 LOC8073850 LOC8079092 LOC102583049 LOC102595356 LOC102613162 LOC100826136 LOC100841533 LOC107759896 LOC107825466
Function* RING-box 1 RING-box protein 1a RING-box protein 1a RING-box protein 1a uncharacterized LOC101259644 RING-box protein 1a uncharacterized LOC4330476 RING-box protein 1-like RING-box protein 1a RING-box protein 1a RING-box protein 1a RING-box protein 1a RING-box protein 1a RING-box protein 1a RING-box protein 1a RING-box protein 1a E3 ubiquitin-protein ligase RBX1 E3 ubiquitin-protein ligase RBX1 RING-box protein 1-like E3 ubiquitin-protein ligase RBX1-like RING-box protein 1a RING-box protein 1a RING-box protein 1a RING-box protein 1a-like uncharacterized protein RING-box protein 1 RING-box protein 1 RING-box protein 1a RING-box protein 1-like RING-box protein 1a RING-box protein 1 RING-box protein 1a RING-box protein 1a uncharacterized LOC107825466
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath04141 Protein processing in endoplasmic reticulum 3
ath00190 Oxidative phosphorylation 3
ath03018 RNA degradation 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 3
gma04120 Ubiquitin mediated proteolysis 3
gma04141 Protein processing in endoplasmic reticulum 3
gma03050 Proteasome 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 3
gma04120 Ubiquitin mediated proteolysis 3
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 7
sly03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa00190 Oxidative phosphorylation 4
osa03050 Proteasome 4
osa00510 N-Glycan biosynthesis 2
osa00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 4
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03420 Nucleotide excision repair 4
zma03015 mRNA surveillance pathway 3
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03420 Nucleotide excision repair 4
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03010 Ribosome 2
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 11
vvi00190 Oxidative phosphorylation 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 9
vvi04136 Autophagy - other 2
vvi03420 Nucleotide excision repair 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo03010 Ribosome 3
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 5
ppo03050 Proteasome 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03050 Proteasome 4
mtr04141 Protein processing in endoplasmic reticulum 4
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
hvu03420 Nucleotide excision repair 2
hvu04120 Ubiquitin mediated proteolysis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04136 Autophagy - other 2
hvu04120 Ubiquitin mediated proteolysis 2
hvu00600 Sphingolipid metabolism 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 7
ghi04141 Protein processing in endoplasmic reticulum 6
ghi03083 Polycomb repressive complex 4
ghi04144 Endocytosis 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 11
cre04141 Protein processing in endoplasmic reticulum 4
cre04120 Ubiquitin mediated proteolysis 3
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi03060 Protein export 4
sbi03420 Nucleotide excision repair 4
sbi04145 Phagosome 3
sbi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03040 Spliceosome 2
sbi03020 RNA polymerase 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 5
cit04120 Ubiquitin mediated proteolysis 4
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 8
bdi03010 Ribosome 3
bdi03420 Nucleotide excision repair 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03420 Nucleotide excision repair 4
bdi03040 Spliceosome 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03082 ATP-dependent chromatin remodeling 2
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 6
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 2
nta00040 Pentose and glucuronate interconversions 2
nta00052 Galactose metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832179 100798515 100789570 101249890 101259644 4326152 4330476 103634739 103649912 103856451 100259489 100246271 7471662 18100330 25492127 11413962 123145238 123128144 123442346 123402745 107932188 121204775 106385158 106408993 5719541 8073850 8079092 102583049 102595356 102613162 100826136 100841533 107759896 107825466
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