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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7471707   proteasome activator subunit 4 
 ppo-r.4   7471707   proteasome activator subunit 4 
 ppo-u.5   18103559   proteasome activator subunit 4 
 gma-u.5   100814812   proteasome activator subunit 4 
 gma-u.5   100781622   proteasome activator subunit 4 
 mtr-u.5   25490747   proteasome activator subunit 4 
 ath-u.5   PA200   proteasome activating protein 200 
 vvi-u.5   100263530   proteasome activator subunit 4 
 sly-u.5   101266536   proteasome activator subunit 4 
 osa-u.5   4340828   proteasome activator subunit 4 
 zma-u.5   100383447   proteasome activator subunit 4 

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Top 50 coexpressed genes to 7471707 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7471707 (ppo-u.5 coexpression data)

CoexMap"7471707"


ppoLOC7471707 | Entrez gene ID : 7471707    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03050 [list] [network] Proteasome (82 genes)
GO BP
GO:0010499 [list] [network] proteasomal ubiquitin-independent protein catabolic process  (2 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0016504 [list] [network] peptidase activator activity  (4 genes)  IEA  
GO:0070628 [list] [network] proteasome binding  (17 genes)  IEA  
Protein XP_024441016.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  E.R. 1,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._vacu 1  (predict for XP_024441016.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024441016.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7471707

.
ppo-r.4
for
7471707

.
ppo-u.5
for
18103559

.
gma-u.5
for
100814812

.
gma-u.5
for
100781622

.
mtr-u.5
for
25490747

.
ath-u.5
for
PA200

.
vvi-u.5
for
100263530

.
sly-u.5
for
101266536

.
osa-u.5
for
4340828

.
zma-u.5
for
100383447

.


Ortholog ID: 7997
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PA200 LOC100781622 LOC100814812 LOC101266536 LOC4340828 LOC100383447 LOC103859510 LOC100263530 LOC18103559 LOC7471707 LOC25490747 LOC123150412 LOC123164775 LOC123409201 LOC107931144 LOC107903402 LOC106389112 LOC106390477 CHLRE_14g628702v5 LOC8072832 LOC102597401 LOC102627147 LOC100845882 LOC107816815 LOC107782113
Function* proteasome activating protein 200 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4-like proteasome activator subunit 4-like proteasome activator subunit 4 uncharacterized protein proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4 proteasome activator subunit 4-like proteasome activator subunit 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 6
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 5
bra03050 Proteasome 3
bra04144 Endocytosis 2
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae04144 Endocytosis 3
tae05100 Bacterial invasion of epithelial cells 3
tae03050 Proteasome 3
tae00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03083 Polycomb repressive complex 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820533 100781622 100814812 101266536 4340828 100383447 103859510 100263530 18103559 7471707 25490747 123150412 123164775 123409201 107931144 107903402 106389112 106390477 5718268 8072832 102597401 102627147 100845882 107816815 107782113
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