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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7471900   uncharacterized LOC7471900 
 ppo-r.4   7471900   uncharacterized LOC7471900 
 ppo-m.4   7471900   uncharacterized LOC7471900 
 gma-u.5   100802263   uncharacterized LOC100802263 
 gma-u.5   100799393   uncharacterized LOC100799393 
 gma-u.5   100783357   uncharacterized LOC100783357 
 mtr-u.5   25487288   uncharacterized LOC25487288 
 mtr-u.5   11444345   uncharacterized LOC11444345 
 ath-u.5   AT3G15110   uncharacterized protein 
 vvi-u.5   100267434   uncharacterized LOC100267434 
 sly-u.5   101264559   uncharacterized LOC101264559 
 osa-u.5   4329119   uncharacterized LOC4329119 
 zma-u.5   100276178   uncharacterized LOC100276178 

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Top 50 coexpressed genes to 7471900 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7471900 (ppo-u.5 coexpression data)

CoexMap"7471900"


ppoLOC7471900 | Entrez gene ID : 7471900    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (105 genes)  IEA  
GO MF
Protein XP_002317372.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  mito 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1,  cyto_E.R. 1  (predict for XP_002317372.4)
Subcellular
localization
TargetP
other 4  (predict for XP_002317372.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7471900

.
ppo-r.4
for
7471900

.
ppo-m.4
for
7471900

.
gma-u.5
for
100802263

.
gma-u.5
for
100799393

.
gma-u.5
for
100783357

.
mtr-u.5
for
25487288

.
mtr-u.5
for
11444345

.
ath-u.5
for
AT3G15110

.
vvi-u.5
for
100267434

.
sly-u.5
for
101264559

.
osa-u.5
for
4329119

.
zma-u.5
for
100276178

.


Ortholog ID: 7568
Species ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol AT3G15110 LOC100799393 LOC100802263 LOC101264559 LOC4329119 LOC100276178 LOC103869955 LOC100267434 LOC7471900 LOC11444345 LOC25487288 LOC123188070 LOC123052208 LOC123429752 LOC121209431 LOC107939179 LOC111215702 CHLRE_03g167400v5 LOC8068892 LOC102589824 LOC102621510 LOC100830225 LOC107812240 LOC107818158
Function* uncharacterized protein uncharacterized LOC100799393 uncharacterized LOC100802263 uncharacterized LOC101264559 uncharacterized LOC4329119 uncharacterized LOC100276178 uncharacterized LOC103869955 uncharacterized LOC100267434 uncharacterized LOC7471900 uncharacterized LOC11444345 uncharacterized LOC25487288 uncharacterized LOC123188070 uncharacterized LOC123052208 uncharacterized LOC123429752 uncharacterized LOC121209431 uncharacterized LOC107939179 uncharacterized LOC111215702 uncharacterized protein uncharacterized LOC8068892 uncharacterized LOC102589824 hypothetical protein uncharacterized LOC100830225 uncharacterized LOC107812240 uncharacterized LOC107818158
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00561 Glycerolipid metabolism 2
gma00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 4
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
cre01230 Biosynthesis of amino acids 3
cre00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00906 Carotenoid biosynthesis 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta00230 Purine metabolism 2
nta00920 Sulfur metabolism 2
nta01320 Sulfur cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820741 100799393 100802263 101264559 4329119 100276178 103869955 100267434 7471900 11444345 25487288 123188070 123052208 123429752 121209431 107939179 111215702 5729001 8068892 102589824 102621510 100830225 107812240 107818158
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