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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7472096   uncharacterized LOC7472096 
 ppo-r.4   7472096   uncharacterized LOC7472096 
 gma-u.5   100789741   coiled-coil domain-containing protein 124 
 gma-u.5   100781326   coiled-coil domain-containing protein 124 
 mtr-u.5   11433906   coiled-coil domain-containing protein 124 
 ath-u.5   AT1G16210   coiled-coil protein 
 vvi-u.5   100265934   uncharacterized LOC100265934 
 sly-u.5   101250060   uncharacterized LOC101250060 
 osa-u.5   107276394   uncharacterized LOC107276394 
 osa-u.5   4336658   uncharacterized LOC4336658 
 zma-u.5   107648858   uncharacterized LOC107648858 

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Top 50 coexpressed genes to 7472096 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7472096 (ppo-u.5 coexpression data)

CoexMap"7472096"


ppoLOC7472096 | Entrez gene ID : 7472096    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006366 [list] [network] transcription by RNA polymerase II  (78 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (49 genes)  IEA  
Protein XP_002313689.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002313689.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002313689.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7472096

.
ppo-r.4
for
7472096

.
gma-u.5
for
100789741

.
gma-u.5
for
100781326

.
mtr-u.5
for
11433906

.
ath-u.5
for
AT1G16210

.
vvi-u.5
for
100265934

.
sly-u.5
for
101250060

.
osa-u.5
for
107276394

.
osa-u.5
for
4336658

.
zma-u.5
for
107648858

.


Ortholog ID: 8236
Species ath gma gma sly osa osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G16210 LOC100781326 LOC100789741 LOC101250060 LOC4336658 LOC107276394 LOC107648858 LOC103831597 LOC100265934 LOC7472096 LOC11433906 LOC123190072 LOC123054183 LOC123427515 LOC107945085 LOC107932304 LOC125589085 LOC106405627 CHLRE_14g629500v5 LOC8056599 LOC102600232 LOC102630684 LOC100821166 LOC107790851 LOC107812406
Function* coiled-coil protein coiled-coil domain-containing protein 124 coiled-coil domain-containing protein 124 uncharacterized LOC101250060 uncharacterized LOC4336658 uncharacterized LOC107276394 uncharacterized LOC107648858 coiled-coil domain-containing protein 124 uncharacterized LOC100265934 uncharacterized LOC7472096 coiled-coil domain-containing protein 124 coiled-coil domain-containing protein 124 coiled-coil domain-containing protein 124 coiled-coil domain-containing protein 124 coiled-coil domain-containing protein 124 coiled-coil domain-containing protein 124 coiled-coil domain-containing protein 124-like coiled-coil domain-containing protein 124 uncharacterized protein coiled-coil domain-containing protein 124 coiled-coil domain-containing protein 124 uncharacterized LOC102630684 coiled-coil domain-containing protein 124 uncharacterized LOC107790851 uncharacterized LOC107812406
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04120 Ubiquitin mediated proteolysis 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 5
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
tae04626 Plant-pathogen interaction 3
tae00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 5
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838189 100781326 100789741 101250060 4336658 107276394 107648858 103831597 100265934 7472096 11433906 123190072 123054183 123427515 107945085 107932304 125589085 106405627 5718365 8056599 102600232 102630684 100821166 107790851 107812406
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