ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7472291	shaggy-related protein kinase eta
ppo-r.4	7472291	shaggy-related protein kinase eta
ppo-u.5	7464890	shaggy-related protein kinase theta
ppo-u.5	7465223	shaggy-related protein kinase alpha
ppo-u.5	112324110	shaggy-related protein kinase alpha
gma-u.5	100788612	shaggy-related protein kinase alpha-like
gma-u.5	100795659	shaggy-related protein kinase alpha
gma-u.5	100788319	shaggy-related protein kinase zeta
mtr-u.5	11431576	glycogen synthase kinase-3 homolog MsK-3
mtr-u.5	11430329	shaggy-related protein kinase kappa
mtr-u.5	11423486	shaggy-related protein kinase theta
ath-u.5	SK41	shaggy-like protein kinase 41
ath-u.5	SK42	shaggy-like kinase 42
ath-u.5	GSK1	GSK3/SHAGGY-like protein kinase 1
vvi-u.5	100252299	shaggy-related protein kinase kappa
vvi-u.5	100855030	shaggy-related protein kinase eta
vvi-u.5	100261256	shaggy-related protein kinase epsilon
sly-u.5	101265073	shaggy-related protein kinase kappa
sly-u.5	101263118	shaggy-related protein kinase epsilon
sly-u.5	101259887	shaggy-related protein kinase NtK-1
osa-u.5	4349147	shaggy-related protein kinase alpha
osa-u.5	4326720	shaggy-related protein kinase alpha
osa-u.5	GSK4	shaggy-related protein kinase GSK4-like
zma-u.5	103637127	shaggy-related protein kinase alpha-like
zma-u.5	542518	uncharacterized LOC542518
zma-u.5	100283734	uncharacterized LOC100283734

Top 50 coexpressed genes to 7472291 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7472291 (ppo-u.5 coexpression data)

CoexMap"7472291"

[Cytoscape]

Annotation

functional annotation

KEGG

pop04075 [list] [network] Plant hormone signal transduction (517 genes)

GO BP

GO:0007165 [list] [network] signal transduction	(941 genes)	IEA
GO:0006468 [list] [network] protein phosphorylation	(1496 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(6111 genes)

IEA

GO MF

GO:0004674 [list] [network] protein serine/threonine kinase activity	(455 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2559 genes)	IEA

Protein

XP_002317404.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 2, mito 1, vacu 1

(predict for XP_002317404.1)

Subcellular
localization
TargetP

other 9

(predict for XP_002317404.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7472291	ppo-r.4 for 7472291	ppo-u.5 for 7464890	ppo-u.5 for 7465223	ppo-u.5 for 112324110	gma-u.5 for 100788612	gma-u.5 for 100795659	gma-u.5 for 100788319	mtr-u.5 for 11431576	mtr-u.5 for 11430329	mtr-u.5 for 11423486	ath-u.5 for SK41	ath-u.5 for SK42	ath-u.5 for GSK1	vvi-u.5 for 100252299	vvi-u.5 for 100855030	vvi-u.5 for 100261256	sly-u.5 for 101265073	sly-u.5 for 101263118	sly-u.5 for 101259887	osa-u.5 for 4349147	osa-u.5 for 4326720	osa-u.5 for GSK4	zma-u.5 for 103637127	zma-u.5 for 542518	zma-u.5 for 100283734

Ortholog

Ortholog ID: 160

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

GSK1

ATSK12

GSK4

Function^*

shaggy-related protein kinase alpha

shaggy-related protein kinase eta

shaggy-related protein kinase alpha

shaggy-related protein kinase eta

glycogen synthase kinase-3 homolog MsK-2

GSK3/SHAGGY-like protein kinase 1

Protein kinase superfamily protein

shaggy-related protein kinase zeta

shaggy-related protein kinase alpha

shaggy-related protein kinase theta

shaggy-related protein kinase kappa

shaggy-related protein kinase zeta-like

shaggy-related protein kinase theta

shaggy-related protein kinase kappa

shaggy-related protein kinase epsilon

GSK3 kinase BIN2-like protein

Shaggy-like protein kinase NtK-1

shaggy-related protein kinase kappa

shaggy-related protein kinase NtK-1-like

shaggy-related protein kinase GSK4-like

shaggy-related protein kinase alpha

shaggy-related protein kinase alpha-like

uncharacterized LOC100273692

shaggy-related protein kinase GSK2

shaggy-related protein kinase GSK1

shaggy-related protein kinase alpha-like

shaggy-related protein kinase alpha

shaggy-related protein kinase kappa

shaggy-related protein kinase eta

shaggy-related protein kinase GSK2

shaggy-related protein kinase alpha

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	5
ppo01240	Biosynthesis of cofactors	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	5
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2
gma04820	Cytoskeleton in muscle cells	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr04075	Plant hormone signal transduction	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3
ath03008	Ribosome biogenesis in eukaryotes	2
ath04712	Circadian rhythm - plant	2
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	5
vvi04141	Protein processing in endoplasmic reticulum	3
vvi03083	Polycomb repressive complex	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00760	Nicotinate and nicotinamide metabolism	3
ghi01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00760	Nicotinate and nicotinamide metabolism	3
ghi01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04517	IgSF CAM signaling	4
bna04518	Integrin signaling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2
nta00600	Sphingolipid metabolism	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	3
osa04141	Protein processing in endoplasmic reticulum	2
osa04136	Autophagy - other	2
osa04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3
tae00440	Phosphonate and phosphinate metabolism	3
tae00564	Glycerophospholipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3
tae00051	Fructose and mannose metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01240	Biosynthesis of cofactors	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	4
bdi01040	Biosynthesis of unsaturated fatty acids	4
bdi01212	Fatty acid metabolism	4
bdi04075	Plant hormone signal transduction	3
bdi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi04120	Ubiquitin mediated proteolysis	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04814	Motor proteins	4
cre04016	MAPK signaling pathway - plant	2
cre04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

7465223

112324110

100812801

100795659

11406396

11417436

837150

819753

103865093

100258056

100266096

107957261

107911956

106346240

106406146

102628101

102626568

101263118

101249039

102577438

102587166

107778566

107829263

4341251

4337722

103641344

100273692

101867529

101867530

123419464

123394911

8079643

8085576

100822328

100827982

5716596

The preparation time of this page was 1.5 [sec].


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7472291 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7472291 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**