Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7472585   putative pentatricopeptide repeat-containing protein At5g08490 
 gma-u.5   100783369   putative pentatricopeptide repeat-containing protein At5g08490 
 mtr-u.5   11425568   putative pentatricopeptide repeat-containing protein At5g08490 
 vvi-u.5   100240784   putative pentatricopeptide repeat-containing protein At5g08490 
 sly-u.5   101247759   putative pentatricopeptide repeat-containing protein At5g08490 
 osa-u.5   4329053   putative pentatricopeptide repeat-containing protein At5g08490 
 zma-u.5   103641674   putative pentatricopeptide repeat-containing protein At5g08490 

close


Top 50 coexpressed genes to 7472585 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7472585 (ppo-m.4 coexpression data)

CoexMap"7472585"


ppoLOC7472585 | Entrez gene ID : 7472585    
Species ppo gma mtr vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi ath sbi cre
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002306009.1 [sequence] [blastp]
XP_024455053.1 [sequence] [blastp]
XP_024455055.1 [sequence] [blastp]
XP_052308023.1 [sequence] [blastp]
XP_052308024.1 [sequence] [blastp]
XP_052308025.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_002306009.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024455053.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024455055.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_052308023.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_052308024.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_052308025.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002306009.1)
other 8  (predict for XP_024455053.1)
other 8  (predict for XP_024455055.1)
other 8  (predict for XP_052308023.1)
other 8  (predict for XP_052308024.1)
other 8  (predict for XP_052308025.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7472585

.
gma-u.5
for
100783369

.
mtr-u.5
for
11425568

.
vvi-u.5
for
100240784

.
sly-u.5
for
101247759

.
osa-u.5
for
4329053

.
zma-u.5
for
103641674

.


Ortholog ID: 11399
Species gma sly osa zma vvi mtr tae hvu ghi ghi sot cit bdi nta nta
Symbol LOC100783369 LOC101247759 LOC4329053 LOC103641674 LOC100240784 LOC11425568 LOC123045545 LOC123426794 LOC107896869 LOC107914418 LOC102601280 LOC102609235 LOC100826728 LOC107793739 LOC107786146
Function* putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
sot00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100783369 101247759 4329053 103641674 100240784 11425568 123045545 123426794 107896869 107914418 102601280 102609235 100826728 107793739 107786146
The preparation time of this page was 0.2 [sec].