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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7473155   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 ppo-r.4   7473155   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 ppo-m.4   7473155   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 ppo-u.5   7478361   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 ppo-u.5   18099300   pentatricopeptide repeat-containing protein At4g36680, mitochondrial 
 ppo-u.5   18094726   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 mtr-u.5   11421506   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 ath-u.5   AT2G18520   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT4G36680   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT1G80150   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100252569   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 vvi-u.5   100246188   small ribosomal subunit protein mL103 (rPPR7) 
 sly-u.5   101262915   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 sly-u.5   101263784   small ribosomal subunit protein mL103 (rPPR7) 
 osa-u.5   4345942   pentatricopeptide repeat-containing protein At1g80150, mitochondrial 
 osa-u.5   4330066   small ribosomal subunit protein mL103 (rPPR7) 
 zma-u.5   100191780   uncharacterized LOC100191780 
 zma-u.5   100383318   Pentatricopeptide repeat-containing protein mitochondrial 

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Top 50 coexpressed genes to 7473155 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7473155 (ppo-u.5 coexpression data)

CoexMap"7473155"


ppoLOC7473155 | Entrez gene ID : 7473155    
Species ppo mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi gma
Paralog 6 1 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002310210.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 2,  cyto_mito 2  (predict for XP_002310210.4)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for XP_002310210.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7473155

.
ppo-r.4
for
7473155

.
ppo-m.4
for
7473155

.
ppo-u.5
for
7478361

.
ppo-u.5
for
18099300

.
ppo-u.5
for
18094726

.
mtr-u.5
for
11421506

.
ath-u.5
for
AT2G18520

.
ath-u.5
for
AT4G36680

.
ath-u.5
for
AT1G80150

.
vvi-u.5
for
100252569

.
vvi-u.5
for
100246188

.
sly-u.5
for
101262915

.
sly-u.5
for
101263784

.
osa-u.5
for
4345942

.
osa-u.5
for
4330066

.
zma-u.5
for
100191780

.
zma-u.5
for
100383318

.


Ortholog ID: 2532
Species ath ath sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT1G80150 AT4G36680 LOC101262915 LOC4330066 LOC4345942 LOC100191780 LOC100383318 LOC103834994 LOC103830421 LOC100252569 LOC100246188 LOC7473155 LOC7478361 LOC11421506 LOC123137556 LOC123401299 LOC123407780 LOC121218644 LOC107937384 LOC106347022 LOC106435094 LOC8066184 LOC8055213 LOC102595216 LOC102586023 LOC127903648 LOC102619638 LOC100846739 LOC100832983 LOC107768085 LOC107822620
Function* Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g80150, mitochondrial small ribosomal subunit protein mL103 (rPPR7) pentatricopeptide repeat-containing protein At1g80150, mitochondrial uncharacterized LOC100191780 Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial small ribosomal subunit protein mL103 (rPPR7) pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like pentatricopeptide repeat-containing protein At2g18520, mitochondrial-like pentatricopeptide repeat-containing protein At2g18520, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At4g36680, mitochondrial pentatricopeptide repeat-containing protein At1g80150, mitochondrial small ribosomal subunit protein mL103 (rPPR7) pentatricopeptide repeat-containing protein At1g80150, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
zma00240 Pyrimidine metabolism 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi01230 Biosynthesis of amino acids 4
vvi00260 Glycine, serine and threonine metabolism 2
vvi00261 Monobactam biosynthesis 2
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03013 Nucleocytoplasmic transport 2
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03013 Nucleocytoplasmic transport 2
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03008 Ribosome biogenesis in eukaryotes 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03018 RNA degradation 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844355 829821 101262915 4330066 4345942 100191780 100383318 103834994 103830421 100252569 100246188 7473155 7478361 11421506 123137556 123401299 123407780 121218644 107937384 106347022 106435094 8066184 8055213 102595216 102586023 127903648 102619638 100846739 100832983 107768085 107822620
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