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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7473424   serine/threonine-protein phosphatase T 
 ppo-r.4   7473424   serine/threonine-protein phosphatase T 
 ppo-m.4   7473424   serine/threonine-protein phosphatase T 
 ppo-u.5   7474177   U-box domain-containing protein 70 
 gma-u.5   100790717   tetratricopeptide repeat-containing protein 
 gma-u.5   100775252   RNA polymerase II-associated protein 3 
 mtr-u.5   25482962   U-box domain-containing protein 70 
 ath-u.5   TPR3   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100266608   uncharacterized LOC100266608 
 sly-u.5   101253624   uncharacterized LOC101253624 
 osa-u.5   4352735   uncharacterized LOC4352735 
 zma-u.5   100194143   uncharacterized LOC100194143 

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Top 50 coexpressed genes to 7473424 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7473424 (ppo-u.5 coexpression data)

CoexMap"7473424"


ppoLOC7473424 | Entrez gene ID : 7473424    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0051879 [list] [network] Hsp90 protein binding  (11 genes)  IEA  
Protein XP_002311636.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_002311636.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002311636.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7473424

.
ppo-r.4
for
7473424

.
ppo-m.4
for
7473424

.
ppo-u.5
for
7474177

.
gma-u.5
for
100790717

.
gma-u.5
for
100775252

.
mtr-u.5
for
25482962

.
ath-u.5
for
TPR3

.
vvi-u.5
for
100266608

.
sly-u.5
for
101253624

.
osa-u.5
for
4352735

.
zma-u.5
for
100194143

.


Ortholog ID: 8715
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol TPR3 LOC100775252 LOC100790717 LOC101253624 LOC4352735 LOC100194143 LOC103836589 LOC100266608 LOC7474177 LOC7473424 LOC25482962 LOC123110460 LOC123102281 LOC123439753 LOC123398822 LOC121232231 LOC107933098 LOC125594482 LOC106401255 CHLRE_02g106850v5 LOC8076661 LOC102592737 LOC102622720 LOC100845023 LOC107811895 LOC107828430
Function* Tetratricopeptide repeat (TPR)-like superfamily protein RNA polymerase II-associated protein 3 tetratricopeptide repeat-containing protein uncharacterized LOC101253624 uncharacterized LOC4352735 uncharacterized LOC100194143 stress-induced-phosphoprotein 1 uncharacterized LOC100266608 U-box domain-containing protein 70 serine/threonine-protein phosphatase T U-box domain-containing protein 70 serine/threonine-protein phosphatase 5 tetratricopeptide repeat protein 1 uncharacterized LOC123439753 RNA polymerase II-associated protein 3 stress-induced-phosphoprotein 1 stress-induced-phosphoprotein 1 serine/threonine-protein phosphatase 5-like stress-induced-phosphoprotein 1 uncharacterized protein stress-induced-phosphoprotein 1 stress-induced-phosphoprotein 1 uncharacterized LOC102622720 stress-induced-phosphoprotein 1 uncharacterized LOC107811895 uncharacterized LOC107828430
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03013 Nucleocytoplasmic transport 2
bra03008 Ribosome biogenesis in eukaryotes 2
bra00230 Purine metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
ghi04075 Plant hormone signal transduction 2
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
ghi04075 Plant hormone signal transduction 2
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00030 Pentose phosphate pathway 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03018 RNA degradation 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839442 100775252 100790717 101253624 4352735 100194143 103836589 100266608 7474177 7473424 25482962 123110460 123102281 123439753 123398822 121232231 107933098 125594482 106401255 5725295 8076661 102592737 102622720 100845023 107811895 107828430
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