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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7475945   uncharacterized LOC7475945 
 ppo-r.4   7475945   uncharacterized LOC7475945 
 ppo-m.4   7475945   uncharacterized LOC7475945 
 gma-u.5   100778721   50S ribosomal protein L33 
 gma-u.5   100811038   50S ribosomal protein L33 
 mtr-u.5   11436020   50S ribosomal protein L33 
 ath-u.5   AT3G06320   Ribosomal protein L33 family protein 
 ath-u.5   AT5G18790   Ribosomal protein L33 family protein 
 sly-u.5   101259734   uncharacterized LOC101259734 
 sly-u.5   101244656   uncharacterized LOC101244656 
 zma-u.5   100283702   50S ribosomal protein L33 

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Top 50 coexpressed genes to 7475945 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7475945 (ppo-u.5 coexpression data)

CoexMap"7475945"


ppoLOC7475945 | Entrez gene ID : 7475945    
Species ppo gma mtr ath sly zma sbi nta bra osa cre cit vvi hvu bdi sot tae bna ghi
Paralog 3 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0015934 [list] [network] large ribosomal subunit  (216 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002314445.1 [sequence] [blastp]
XP_024467163.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_002314445.1)
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_024467163.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_002314445.1)
other 5,  mito 3  (predict for XP_024467163.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7475945

.
ppo-r.4
for
7475945

.
ppo-m.4
for
7475945

.
gma-u.5
for
100778721

.
gma-u.5
for
100811038

.
mtr-u.5
for
11436020

.
ath-u.5
for
AT3G06320

.
ath-u.5
for
AT5G18790

.
sly-u.5
for
101259734

.
sly-u.5
for
101244656

.
zma-u.5
for
100283702

.


Ortholog ID: 5499
Species ath ath gma gma sly sly zma bra ppo mtr tae tae hvu ghi ghi bna bna cre sot sot cit bdi nta
Symbol AT3G06320 AT5G18790 LOC100811038 LOC100778721 LOC101259734 LOC101244656 LOC100283702 LOC103845804 LOC7475945 LOC11436020 LOC123182621 LOC123062823 LOC123444473 LOC107897638 LOC107916122 LOC106434093 LOC106371911 CHLRE_16g653601v5 LOC102594603 LOC102582925 LOC102621239 LOC100827677 LOC107818795
Function* Ribosomal protein L33 family protein Ribosomal protein L33 family protein 50S ribosomal protein L33 50S ribosomal protein L33 uncharacterized LOC101259734 uncharacterized LOC101244656 50S ribosomal protein L33 50S ribosomal protein L33 uncharacterized LOC7475945 50S ribosomal protein L33 50S ribosomal protein L33 50S ribosomal protein L33 50S ribosomal protein L33-like 50S ribosomal protein L33 50S ribosomal protein L33 50S ribosomal protein L33-like 50S ribosomal protein L33-like uncharacterized protein 50S ribosomal protein L33-like 50S ribosomal protein L33-like uncharacterized LOC102621239 50S ribosomal protein L33 uncharacterized LOC107818795
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
sly04141 Protein processing in endoplasmic reticulum 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03040 Spliceosome 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi03060 Protein export 3
ghi04141 Protein processing in endoplasmic reticulum 3
ghi04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi03060 Protein export 3
ghi04141 Protein processing in endoplasmic reticulum 3
ghi04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 5
cre03420 Nucleotide excision repair 3
cre03020 RNA polymerase 2
cre04120 Ubiquitin mediated proteolysis 2
cre04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03420 Nucleotide excision repair 3
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 13
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta04120 Ubiquitin mediated proteolysis 3
nta03013 Nucleocytoplasmic transport 2
nta00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819806 831997 100811038 100778721 101259734 101244656 100283702 103845804 7475945 11436020 123182621 123062823 123444473 107897638 107916122 106434093 106371911 66056522 102594603 102582925 102621239 100827677 107818795
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