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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7476828   uncharacterized LOC7476828 
 ppo-r.4   7476828   uncharacterized LOC7476828 
 gma-u.5   100500662   RWD, IBR and zinc finger domain-containing protein 
 mtr-u.5   11434937   E3 ubiquitin-protein ligase RNF14 
 ath-u.5   NHL8   NDR1/HIN1-like 8 
 vvi-u.5   100262589   uncharacterized LOC100262589 
 sly-u.5   101263135   uncharacterized LOC101263135 
 osa-u.5   107277794   uncharacterized LOC107277794 
 osa-u.5   9266311   uncharacterized LOC9266311 
 osa-u.5   4336837   uncharacterized LOC4336837 
 zma-u.5   103627581   E3 ubiquitin-protein ligase RNF14 
 zma-u.5   103648421   E3 ubiquitin-protein ligase RNF14 

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Top 50 coexpressed genes to 7476828 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476828 (ppo-u.5 coexpression data)

CoexMap"7476828"


ppoLOC7476828 | Entrez gene ID : 7476828    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (38 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (88 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (340 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (189 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (31 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (225 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
Protein XP_024445446.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_024445446.2)
Subcellular
localization
TargetP
mito 7  (predict for XP_024445446.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7476828

.
ppo-r.4
for
7476828

.
gma-u.5
for
100500662

.
mtr-u.5
for
11434937

.
ath-u.5
for
NHL8

.
vvi-u.5
for
100262589

.
sly-u.5
for
101263135

.
osa-u.5
for
107277794

.
osa-u.5
for
9266311

.
osa-u.5
for
4336837

.
zma-u.5
for
103627581

.
zma-u.5
for
103648421

.


Ortholog ID: 5019
Species ath gma sly osa osa zma zma bra vvi ppo mtr tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol NHL8 LOC100500662 LOC101263135 LOC9266311 LOC4336837 LOC103627581 LOC103648421 LOC103874739 LOC100262589 LOC7476828 LOC11434937 LOC123190346 LOC123427891 LOC123427898 LOC107946759 LOC107944171 LOC106352954 LOC106432393 CHLRE_01g018900v5 LOC110435074 LOC8063901 LOC102592226 LOC102606785 LOC100840487 LOC107778736 LOC107794933
Function* NDR1/HIN1-like 8 RWD, IBR and zinc finger domain-containing protein uncharacterized LOC101263135 uncharacterized LOC9266311 uncharacterized LOC4336837 E3 ubiquitin-protein ligase RNF14 E3 ubiquitin-protein ligase RNF14 E3 ubiquitin-protein ligase RNF14 uncharacterized LOC100262589 uncharacterized LOC7476828 E3 ubiquitin-protein ligase RNF14 E3 ubiquitin-protein ligase RNF14 E3 ubiquitin-protein ligase RNF14-like E3 ubiquitin-protein ligase RNF14-like E3 ubiquitin-protein ligase RNF14 E3 ubiquitin-protein ligase RNF14 E3 ubiquitin-protein ligase RNF14-like E3 ubiquitin-protein ligase RNF14 uncharacterized protein E3 ubiquitin-protein ligase RNF14-like E3 ubiquitin-protein ligase RNF14 E3 ubiquitin-protein ligase RNF14 uncharacterized LOC102606785 E3 ubiquitin-protein ligase RNF14 uncharacterized LOC107778736 uncharacterized LOC107794933
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 8
gma00450 Selenocompound metabolism 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo01200 Carbon metabolism 2
ppo02010 ABC transporters 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 4
mtr01200 Carbon metabolism 4
mtr01230 Biosynthesis of amino acids 4
mtr00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu00270 Cysteine and methionine metabolism 2
hvu01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 5
ghi01200 Carbon metabolism 5
ghi00190 Oxidative phosphorylation 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 5
ghi01200 Carbon metabolism 5
ghi00190 Oxidative phosphorylation 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840126 100500662 101263135 9266311 4336837 103627581 103648421 103874739 100262589 7476828 11434937 123190346 123427891 123427898 107946759 107944171 106352954 106432393 5715168 110435074 8063901 102592226 102606785 100840487 107778736 107794933
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