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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7477030   mannosyl-oligosaccharide glucosidase GCS1 
 ppo-r.4   7477030   mannosyl-oligosaccharide glucosidase GCS1 
 ppo-m.4   7477030   mannosyl-oligosaccharide glucosidase GCS1 
 gma-u.5   100795691   mannosyl-oligosaccharide glucosidase GCS1 
 gma-u.5   100795161   mannosyl-oligosaccharide glucosidase GCS1 
 mtr-u.5   25501732   mannosyl-oligosaccharide glucosidase GCS1 
 ath-u.5   AT1G24320   Six-hairpin glycosidases superfamily protein 
 ath-u.5   GCS1   glucosidase 1 
 vvi-u.5   100264375   mannosyl-oligosaccharide glucosidase GCS1 
 sly-u.5   101267114   mannosyl-oligosaccharide glucosidase GCS1 
 osa-u.5   4327748   mannosyl-oligosaccharide glucosidase GCS1 
 zma-u.5   103652327   alpha-glucosidase 2 

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Top 50 coexpressed genes to 7477030 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7477030 (ppo-u.5 coexpression data)

CoexMap"7477030"


ppoLOC7477030 | Entrez gene ID : 7477030    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00510 [list] [network] N-Glycan biosynthesis (62 genes)
pop04141 [list] [network] Protein processing in endoplasmic reticulum (286 genes)
GO BP
GO:0006487 [list] [network] protein N-linked glycosylation  (60 genes)  IEA  
GO:0009311 [list] [network] oligosaccharide metabolic process  (72 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (280 genes)  IEA  
GO MF
GO:0004573 [list] [network] Glc3Man9GlcNAc2 oligosaccharide glucosidase activity  (1 genes)  IEA  
Protein XP_002315613.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 1,  cyto 1,  plas 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_002315613.1)
Subcellular
localization
TargetP
chlo 3,  mito 3  (predict for XP_002315613.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7477030

.
ppo-r.4
for
7477030

.
ppo-m.4
for
7477030

.
gma-u.5
for
100795691

.
gma-u.5
for
100795161

.
mtr-u.5
for
25501732

.
ath-u.5
for
AT1G24320

.
ath-u.5
for
GCS1

.
vvi-u.5
for
100264375

.
sly-u.5
for
101267114

.
osa-u.5
for
4327748

.
zma-u.5
for
103652327

.


Ortholog ID: 8710
Species ath ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol GCS1 AT1G24320 LOC100795161 LOC100795691 LOC101267114 LOC4327748 LOC103652327 LOC103829083 LOC103831024 LOC100264375 LOC7477030 LOC25501732 LOC123063379 LOC123080307 LOC123445241 LOC107918230 LOC107922345 LOC106411018 LOC106425420 CHLRE_13g579734v5 LOC8059369 LOC102580572 LOC102626422 LOC100822845 LOC107796835 LOC107810418
Function* glucosidase 1 Six-hairpin glycosidases superfamily protein mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 alpha-glucosidase 2 alpha-glucosidase 2 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 alpha-glucosidase 2 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1-like mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 alpha-glucosidase 2-like uncharacterized protein alpha-glucosidase 2 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1 mannosyl-oligosaccharide glucosidase GCS1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 9
ath00510 N-Glycan biosynthesis 6
ath00513 Various types of N-glycan biosynthesis 5
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04142 Lysosome 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly00510 N-Glycan biosynthesis 4
sly00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa00510 N-Glycan biosynthesis 3
osa04148 Efferocytosis 2
osa00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 5
zma04144 Endocytosis 2
zma05100 Bacterial invasion of epithelial cells 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 3
bra00513 Various types of N-glycan biosynthesis 3
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 11
ppo00510 N-Glycan biosynthesis 7
ppo00513 Various types of N-glycan biosynthesis 6
ppo00190 Oxidative phosphorylation 4
ppo04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 15
tae03420 Nucleotide excision repair 3
tae04120 Ubiquitin mediated proteolysis 3
tae03430 Mismatch repair 2
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 12
tae00510 N-Glycan biosynthesis 11
tae00513 Various types of N-glycan biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03460 Fanconi anemia pathway 3
ghi00510 N-Glycan biosynthesis 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi00510 N-Glycan biosynthesis 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
bna00510 N-Glycan biosynthesis 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 9
cre00510 N-Glycan biosynthesis 8
cre00513 Various types of N-glycan biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 5
sbi00510 N-Glycan biosynthesis 4
sbi00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 4
nta04141 Protein processing in endoplasmic reticulum 4
nta03082 ATP-dependent chromatin remodeling 3
nta03083 Polycomb repressive complex 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04148 Efferocytosis 2
nta00510 N-Glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843070 839048 100795161 100795691 101267114 4327748 103652327 103829083 103831024 100264375 7477030 25501732 123063379 123080307 123445241 107918230 107922345 106411018 106425420 5719301 8059369 102580572 102626422 100822845 107796835 107810418
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