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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7477808   photosystem I reaction center subunit III, chloroplastic 
 ppo-r.4   7477808   photosystem I reaction center subunit III, chloroplastic 
 ppo-m.4   7477808   photosystem I reaction center subunit III, chloroplastic 
 gma-u.5   100807732   photosystem I reaction center subunit III, chloroplastic 
 mtr-u.5   25486289   photosystem I reaction center subunit III, chloroplastic 
 ath-u.5   PSAF   photosystem I subunit F 
 vvi-u.5   100247987   photosystem I reaction center subunit III, chloroplastic 
 sly-u.5   101245421   photosystem I reaction center subunit III, chloroplastic 
 sly-u.5   101245121   photosystem I reaction center subunit III, chloroplastic 
 osa-u.5   4334300   photosystem I reaction center subunit III, chloroplastic 
 zma-u.5   100282027   photosystem I reaction center subunit III 
 zma-u.5   103625835   photosystem I reaction center subunit III, chloroplastic 

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Top 50 coexpressed genes to 7477808 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7477808 (ppo-u.5 coexpression data)

CoexMap"7477808"


ppoLOC7477808 | Entrez gene ID : 7477808    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00195 [list] [network] Photosynthesis (104 genes)
GO BP
GO:0015979 [list] [network] photosynthesis  (119 genes)  IEA  
GO CC
GO:0009538 [list] [network] photosystem I reaction center  (7 genes)  IEA  
GO:0009522 [list] [network] photosystem I  (16 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (105 genes)  IEA  
GO MF
Protein XP_002299414.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  extr 1,  vacu 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_002299414.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002299414.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7477808

.
ppo-r.4
for
7477808

.
ppo-m.4
for
7477808

.
gma-u.5
for
100807732

.
mtr-u.5
for
25486289

.
ath-u.5
for
PSAF

.
vvi-u.5
for
100247987

.
sly-u.5
for
101245421

.
sly-u.5
for
101245121

.
osa-u.5
for
4334300

.
zma-u.5
for
100282027

.
zma-u.5
for
103625835

.


Ortholog ID: 5901
Species ath gma sly sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol PSAF LOC100807732 LOC101245121 LOC101245421 LOC4334300 LOC103625835 LOC100282027 LOC103828782 LOC103833816 LOC100247987 LOC7477808 LOC25486289 LOC123113505 LOC123123037 LOC123452500 LOC107958325 LOC107961788 LOC106401573 LOC106415198 CHLRE_09g412100v5 LOC8084161 LOC102585620 LOC102585281 LOC102616249 LOC100831679 LOC107770672 LOC107789388
Function* photosystem I subunit F photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic uncharacterized protein photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic-like photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic photosystem I reaction center subunit III, chloroplastic-like photosystem I reaction center subunit III, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 14
ath00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 13
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 13
sly00196 Photosynthesis - antenna proteins 3
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 12
sly00196 Photosynthesis - antenna proteins 4
sly00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 12
zma00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 10
bra00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 11
bra00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 13
vvi00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 11
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 17
tae00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 8
hvu00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00730 Thiamine metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
ghi00196 Photosynthesis - antenna proteins 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi00730 Thiamine metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
ghi00906 Carotenoid biosynthesis 2
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 9
cre00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 11
sbi00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 14
sot00196 Photosynthesis - antenna proteins 3
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 14
cit00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 9
bdi00196 Photosynthesis - antenna proteins 4
bdi00860 Porphyrin metabolism 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 6
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840021 100807732 101245121 101245421 4334300 103625835 100282027 103828782 103833816 100247987 7477808 25486289 123113505 123123037 123452500 107958325 107961788 106401573 106415198 5722300 8084161 102585620 102585281 102616249 100831679 107770672 107789388
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