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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7477868   eukaryotic translation initiation factor 4B3 
 ppo-r.4   7477868   eukaryotic translation initiation factor 4B3 
 ppo-m.4   7477868   eukaryotic translation initiation factor 4B3 
 ppo-u.5   7472145   eukaryotic translation initiation factor 4B3 
 gma-u.5   100820014   eukaryotic translation initiation factor 4B3 
 gma-u.5   100798129   eukaryotic translation initiation factor 4B3 
 mtr-u.5   25492808   eukaryotic translation initiation factor 4B3 
 ath-u.5   AT4G38710   glycine-rich protein 
 bra-r.6   103835167   eukaryotic translation initiation factor 4B3 
 vvi-u.5   100262348   eukaryotic translation initiation factor 4B3 
 ghi-r.1   107949077   eukaryotic translation initiation factor 4B3 
 ghi-r.1   107898589   eukaryotic translation initiation factor 4B3 
 ghi-r.1   107908668   eukaryotic translation initiation factor 4B3 
 bna-r.1   125604011   eukaryotic translation initiation factor 4B3-like 
 bna-r.1   106361533   eukaryotic translation initiation factor 4B3-like 
 bna-r.1   106357690   eukaryotic translation initiation factor 4B3 
 cit-r.1   102624160   eukaryotic translation initiation factor 4B3 
 sly-u.5   101256330   eukaryotic translation initiation factor 4B3 
 sot-r.1   102579361   eukaryotic translation initiation factor 4B3-like 
 nta-r.1   107824058   eukaryotic translation initiation factor 4B3 
 nta-r.1   107790603   eukaryotic translation initiation factor 4B3 
 osa-u.5   4329233   eukaryotic translation initiation factor 4B3 
 tae-r.2   123127480   eukaryotic translation initiation factor 4B3 
 tae-r.2   123127481   eukaryotic translation initiation factor 4B3-like 
 tae-r.2   123137227   eukaryotic translation initiation factor 4B3 
 hvu-r.1   123406184   eukaryotic translation initiation factor 4B3-like 
 bdi-r.1   100829111   eukaryotic translation initiation factor 4B3 

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Top 50 coexpressed genes to 7477868 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7477868 (ppo-u.5 coexpression data)

CoexMap"7477868"


ppoLOC7477868 | Entrez gene ID : 7477868    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa tae hvu bdi sbi cre zma
Paralog 4 2 1 1 1 1 3 3 1 1 1 2 1 3 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (90 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (348 genes)  IEA  
Protein XP_002305490.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002305490.3)
Subcellular
localization
TargetP
other 8  (predict for XP_002305490.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7477868
ppo-r.4
for
7477868
ppo-m.4
for
7477868
ppo-u.5
for
7472145
gma-u.5
for
100820014
gma-u.5
for
100798129
mtr-u.5
for
25492808
ath-u.5
for
AT4G38710
bra-r.6
for
103835167
vvi-u.5
for
100262348
ghi-r.1
for
107949077
ghi-r.1
for
107898589
ghi-r.1
for
107908668
bna-r.1
for
125604011
bna-r.1
for
106361533
bna-r.1
for
106357690
cit-r.1
for
102624160
sly-u.5
for
101256330
sot-r.1
for
102579361
nta-r.1
for
107824058
nta-r.1
for
107790603
osa-u.5
for
4329233
tae-r.2
for
123127480
tae-r.2
for
123127481
tae-r.2
for
123137227
hvu-r.1
for
123406184
bdi-r.1
for
100829111


Ortholog ID: 7697
Species ppo ppo gma gma mtr ath bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa tae tae tae hvu bdi
Symbol LOC7477868 LOC7472145 LOC100820014 LOC100798129 LOC25492808 AT4G38710 LOC103835167 LOC100262348 LOC107949077 LOC107908668 LOC107932732 LOC125604011 LOC106361533 LOC106357690 LOC102624160 LOC101256330 LOC102579361 LOC107824058 LOC107790603 LOC4329233 LOC123127480 LOC123144629 LOC123176532 LOC123406184 LOC100829111
Function* eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 glycine-rich protein eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3-like eukaryotic translation initiation factor 4B3-like eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3-like eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3 eukaryotic translation initiation factor 4B3-like eukaryotic translation initiation factor 4B3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 3
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr00190 Oxidative phosphorylation 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00750 Vitamin B6 metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03010 Ribosome 3
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03008 Ribosome biogenesis in eukaryotes 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7477868 7472145 100820014 100798129 25492808 830027 103835167 100262348 107949077 107908668 107932732 125604011 106361533 106357690 102624160 101256330 102579361 107824058 107790603 4329233 123127480 123144629 123176532 123406184 100829111
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