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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478294   nuclear pore complex protein NUP96 
 ppo-r.4   7478294   nuclear pore complex protein NUP96 
 gma-u.5   100790967   nuclear pore complex protein NUP96 
 mtr-u.5   11433942   nuclear pore complex protein NUP96 
 ath-u.5   SAR3   SUPPRESSOR OF AUXIN RESISTANCE 3 
 vvi-u.5   100257675   nuclear pore complex protein NUP96 
 sly-u.5   101266921   nuclear pore complex protein NUP96 
 osa-u.5   4331780   nuclear pore complex protein NUP96 
 zma-u.5   103639534   nuclear pore complex protein NUP96 
 zma-u.5   103628666   nuclear pore complex protein NUP96 

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Top 50 coexpressed genes to 7478294 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478294 (ppo-u.5 coexpression data)

CoexMap"7478294"


ppoLOC7478294 | Entrez gene ID : 7478294    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03013 [list] [network] Nucleocytoplasmic transport (142 genes)
GO BP
GO:0006913 [list] [network] nucleocytoplasmic transport  (138 genes)  IEA  
GO CC
GO:0005643 [list] [network] nuclear pore  (51 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IEA  
Protein XP_002303836.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_002303836.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002303836.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478294

.
ppo-r.4
for
7478294

.
gma-u.5
for
100790967

.
mtr-u.5
for
11433942

.
ath-u.5
for
SAR3

.
vvi-u.5
for
100257675

.
sly-u.5
for
101266921

.
osa-u.5
for
4331780

.
zma-u.5
for
103639534

.
zma-u.5
for
103628666

.


Ortholog ID: 9306
Species ath gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol SAR3 LOC100790967 LOC101266921 LOC4331780 LOC103628666 LOC103639534 LOC103853457 LOC103830450 LOC100257675 LOC7478294 LOC11433942 LOC123093324 LOC123084761 LOC123449572 LOC107914183 LOC107897340 LOC106406544 LOC125604552 LOC8059807 LOC102602221 LOC102607573 LOC100846343 LOC107763793 LOC107824484
Function* SUPPRESSOR OF AUXIN RESISTANCE 3 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96-like nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96 nuclear pore complex protein NUP96
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03082 ATP-dependent chromatin remodeling 2
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03013 Nucleocytoplasmic transport 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 6
bra03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 4
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03040 Spliceosome 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03450 Non-homologous end-joining 4
ghi03440 Homologous recombination 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03440 Homologous recombination 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot00970 Aminoacyl-tRNA biosynthesis 2
sot00230 Purine metabolism 2
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
cit00970 Aminoacyl-tRNA biosynthesis 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 7
nta03008 Ribosome biogenesis in eukaryotes 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 7
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844407 100790967 101266921 4331780 103628666 103639534 103853457 103830450 100257675 7478294 11433942 123093324 123084761 123449572 107914183 107897340 106406544 125604552 8059807 102602221 102607573 100846343 107763793 107824484
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