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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478377   pentatricopeptide repeat-containing protein At1g15510, chloroplastic 
 ppo-r.4   7478377   pentatricopeptide repeat-containing protein At1g15510, chloroplastic 
 ppo-m.4   7478377   pentatricopeptide repeat-containing protein At1g15510, chloroplastic 
 gma-u.5   100794338   pentatricopeptide repeat-containing protein At1g15510, chloroplastic 
 mtr-u.5   25491357   pentatricopeptide repeat-containing protein At1g15510, chloroplastic 
 ath-u.5   ECB2   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100263494   pentatricopeptide repeat-containing protein At1g15510, chloroplastic 
 sly-u.5   101255183   pentatricopeptide repeat-containing protein At1g15510, chloroplastic 
 osa-u.5   4339686   pentatricopeptide repeat-containing protein At1g15510, chloroplastic 
 zma-u.5   103630763   pentatricopeptide repeat-containing protein At1g15510, chloroplastic 

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Top 50 coexpressed genes to 7478377 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478377 (ppo-u.5 coexpression data)

CoexMap"7478377"


ppoLOC7478377 | Entrez gene ID : 7478377    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002303270.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_002303270.3)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002303270.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478377

.
ppo-r.4
for
7478377

.
ppo-m.4
for
7478377

.
gma-u.5
for
100794338

.
mtr-u.5
for
25491357

.
ath-u.5
for
ECB2

.
vvi-u.5
for
100263494

.
sly-u.5
for
101255183

.
osa-u.5
for
4339686

.
zma-u.5
for
103630763

.


Ortholog ID: 11047
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi bdi nta nta
Symbol ECB2 LOC100794338 LOC101255183 LOC4339686 LOC103630763 LOC103872347 LOC100263494 LOC7478377 LOC25491357 LOC123069274 LOC123183222 LOC123451314 LOC107951873 LOC107949565 LOC125587499 LOC106346650 LOC8064710 LOC102584228 LOC102623370 LOC100831637 LOC104584633 LOC107763547 LOC107806955
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic pentatricopeptide repeat-containing protein At1g15510, chloroplastic uncharacterized LOC104584633 pentatricopeptide repeat-containing protein At1g15510, chloroplastic-like pentatricopeptide repeat-containing protein At1g15510, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838121 100794338 101255183 4339686 103630763 103872347 100263494 7478377 25491357 123069274 123183222 123451314 107951873 107949565 125587499 106346650 8064710 102584228 102623370 100831637 104584633 107763547 107806955
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