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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478587   F-box/WD-40 repeat-containing protein At5g21040 
 ppo-r.4   7478587   F-box/WD-40 repeat-containing protein At5g21040 
 ppo-m.4   7478587   F-box/WD-40 repeat-containing protein At5g21040 
 gma-u.5   100787803   F-box/WD-40 repeat-containing protein At5g21040 
 gma-u.5   100786984   F-box/WD-40 repeat-containing protein At5g21040 
 mtr-u.5   11421437   F-box/WD-40 repeat-containing protein At5g21040 
 ath-u.5   FBX2   F-box protein 2 
 sly-u.5   101268478   F-box/WD-40 repeat-containing protein At5g21040 
 sly-u.5   101265098   F-box/WD-40 repeat-containing protein At5g21040 
 osa-u.5   4337024   F-box/WD-40 repeat-containing protein At5g21040 
 zma-u.5   100282533   F-box domain containing protein 

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Top 50 coexpressed genes to 7478587 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478587 (ppo-u.5 coexpression data)

CoexMap"7478587"


ppoLOC7478587 | Entrez gene ID : 7478587    
Species ppo gma mtr ath sly osa zma sbi nta bra cre vvi cit hvu bdi sot tae bna ghi
Paralog 3 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (36 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024464536.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  cyto_plas 3  (predict for XP_024464536.1)
Subcellular
localization
TargetP
other 7  (predict for XP_024464536.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478587

.
ppo-r.4
for
7478587

.
ppo-m.4
for
7478587

.
gma-u.5
for
100787803

.
gma-u.5
for
100786984

.
mtr-u.5
for
11421437

.
ath-u.5
for
FBX2

.
sly-u.5
for
101268478

.
sly-u.5
for
101265098

.
osa-u.5
for
4337024

.
zma-u.5
for
100282533

.


Ortholog ID: 8156
Species ath gma gma sly sly osa zma bra ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol FBX2 LOC100786984 LOC100787803 LOC101265098 LOC101268478 LOC4337024 LOC100282533 LOC103845618 LOC7478587 LOC11421437 LOC123054592 LOC123046739 LOC123430791 LOC121217637 LOC107959251 LOC106421355 LOC106371696 CHLRE_07g355750v5 LOC8074721 LOC102590474 LOC102587434 LOC102628695 LOC100820970 LOC107779159 LOC107826055
Function* F-box protein 2 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box domain containing protein F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040-like uncharacterized protein F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040-like F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 F-box/WD-40 repeat-containing protein At5g21040 uncharacterized LOC107779159 F-box/WD-40 repeat-containing protein At5g21040-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00790 Folate biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00740 Riboflavin metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr04075 Plant hormone signal transduction 2
mtr00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 2
tae03015 mRNA surveillance pathway 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 4
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832228 100786984 100787803 101265098 101268478 4337024 100282533 103845618 7478587 11421437 123054592 123046739 123430791 121217637 107959251 106421355 106371696 66054236 8074721 102590474 102587434 102628695 100820970 107779159 107826055
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