ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7478703	uncharacterized LOC7478703
ppo-r.4	7478703	uncharacterized LOC7478703
ppo-m.4	7478703	uncharacterized LOC7478703
ppo-u.5	18097317	uncharacterized LOC18097317
ppo-u.5	7484334	uncharacterized LOC7484334
gma-u.5	102665936	uncharacterized LOC102665936
gma-u.5	100808914	uncharacterized LOC100808914
gma-u.5	100801458	uncharacterized LOC100801458
mtr-u.5	11407163	gem-associated protein 2
mtr-u.5	25489042	uncharacterized LOC25489042
ath-u.5	AT4G22320	golgin family A protein
ath-u.5	AT5G55210	uncharacterized protein
bra-r.6	103859949	uncharacterized LOC103859949
bra-r.6	103844964	uncharacterized LOC103844964
bra-r.6	103857001	uncharacterized LOC103857001
vvi-u.5	100855038	uncharacterized LOC100855038
vvi-u.5	100257277	uncharacterized LOC100257277
ghi-r.1	107922086	uncharacterized LOC107922086
ghi-r.1	107925282	homeobox protein 2
ghi-r.1	107930415	myb-like protein A
bna-r.1	125589921	glutamic acid-rich protein-like
bna-r.1	BNAA10G09450D	uncharacterized BNAA10G09450D
cit-r.1	102610682	hypothetical protein
cit-r.1	102606699	uncharacterized LOC102606699
sly-u.5	101262609	uncharacterized LOC101262609
sly-u.5	101252348	uncharacterized LOC101252348
sly-u.5	101246405	uncharacterized LOC101246405
sot-r.1	102589747	uncharacterized LOC102589747
sot-r.1	102600133	uncharacterized LOC102600133
sot-r.1	102602071	uncharacterized LOC102602071
nta-r.1	107785312	uncharacterized LOC107785312
nta-r.1	107827763	uncharacterized LOC107827763
nta-r.1	107786148	uncharacterized LOC107786148
osa-u.5	9269071	uncharacterized LOC9269071
zma-u.5	100276726	uncharacterized LOC100276726
tae-r.2	123154596	uncharacterized LOC123154596
tae-r.2	123161638	uncharacterized LOC123161638
hvu-r.1	123411347	uncharacterized LOC123411347
sbi-r.1	110436899	uncharacterized LOC110436899
sbi-r.1	8067995	uncharacterized LOC8067995
bdi-r.1	100836363	uncharacterized LOC100836363

Top 50 coexpressed genes to 7478703 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7478703 (ppo-u.5 coexpression data)

CoexMap"7478703"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002300329.4 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo 4, nucl 2, cyto_mito 2, mito_plas 2

(predict for XP_002300329.4)

Subcellular
localization
TargetP

mito 5, chlo 3

(predict for XP_002300329.4)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7478703	ppo-r.4 for 7478703	ppo-m.4 for 7478703	ppo-u.5 for 18097317	ppo-u.5 for 7484334	gma-u.5 for 102665936	gma-u.5 for 100808914	gma-u.5 for 100801458	mtr-u.5 for 11407163	mtr-u.5 for 25489042	ath-u.5 for AT4G22320	ath-u.5 for AT5G55210	bra-r.6 for 103859949	bra-r.6 for 103844964	bra-r.6 for 103857001	vvi-u.5 for 100855038	vvi-u.5 for 100257277	ghi-r.1 for 107922086	ghi-r.1 for 107925282	ghi-r.1 for 107930415	bna-r.1 for 125589921	bna-r.1 for BNAA10G09450D	cit-r.1 for 102610682	cit-r.1 for 102606699	sly-u.5 for 101262609	sly-u.5 for 101252348	sly-u.5 for 101246405	sot-r.1 for 102589747	sot-r.1 for 102600133	sot-r.1 for 102602071	nta-r.1 for 107785312	nta-r.1 for 107827763	nta-r.1 for 107786148	osa-u.5 for 9269071	zma-u.5 for 100276726	tae-r.2 for 123154596	tae-r.2 for 123161638	hvu-r.1 for 123411347	sbi-r.1 for 110436899	sbi-r.1 for 8067995	bdi-r.1 for 100836363

Ortholog

Ortholog ID: 2663

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7478703

uncharacterized LOC18097317

uncharacterized LOC7484334

uncharacterized LOC102665936

uncharacterized LOC100801458

uncharacterized LOC100527395

gem-associated protein 2

uncharacterized LOC25489042

golgin family A protein

uncharacterized protein

uncharacterized LOC103844964

uncharacterized LOC103857001

uncharacterized LOC103861300

uncharacterized LOC100855038

uncharacterized LOC100257277

homeobox protein 2

myb-like protein A

uncharacterized LOC107917859

uncharacterized BNAA10G09450D

uncharacterized LOC106371427

uncharacterized LOC106376514

hypothetical protein

uncharacterized LOC102606699

uncharacterized LOC101262609

uncharacterized LOC101252348

uncharacterized LOC101246405

uncharacterized LOC102589747

uncharacterized LOC102600133

uncharacterized LOC102602071

uncharacterized LOC107827763

uncharacterized LOC107804964

uncharacterized LOC107819795

uncharacterized LOC9269071

uncharacterized LOC100276726

uncharacterized LOC123154596

uncharacterized LOC123161638

uncharacterized LOC123411347

uncharacterized LOC110436899

uncharacterized LOC8067995

uncharacterized LOC100836363

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma03010	Ribosome	2
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	6
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	3
mtr03040	Spliceosome	2
mtr03420	Nucleotide excision repair	2
mtr00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra00190	Oxidative phosphorylation	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00240	Pyrimidine metabolism	2
bra01232	Nucleotide metabolism	2
bra04145	Phagosome	2
bra04148	Efferocytosis	2
bra04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	6
ghi03015	mRNA surveillance pathway	6
ghi03040	Spliceosome	6
ghi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	11
ghi03015	mRNA surveillance pathway	11
ghi03040	Spliceosome	11
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00230	Purine metabolism	2
cit01232	Nucleotide metabolism	2
cit03082	ATP-dependent chromatin remodeling	2
cit03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03060	Protein export	4
cit04141	Protein processing in endoplasmic reticulum	3
cit04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	3
sly01200	Carbon metabolism	3
sly01230	Biosynthesis of amino acids	3
sly00190	Oxidative phosphorylation	2
sly00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	4
sly00510	N-Glycan biosynthesis	2
sly00513	Various types of N-glycan biosynthesis	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	4
sot03015	mRNA surveillance pathway	3
sot03050	Proteasome	3
sot00190	Oxidative phosphorylation	2
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta03015	mRNA surveillance pathway	4
nta04136	Autophagy - other	4
nta04382	Cornified envelope formation	4
nta00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04145	Phagosome	3
osa03060	Protein export	2
osa04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae04141	Protein processing in endoplasmic reticulum	3
tae03015	mRNA surveillance pathway	3
tae04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	5
tae04120	Ubiquitin mediated proteolysis	3
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	2
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

7478703

18097317

7484334

102665936

100801458

100527395

11407163

25489042

828327

835614

103844964

103857001

103861300

100855038

100257277

107925282

107930415

107917859

106371426

106371427

106376514

102610682

102606699

101262609

101252348

101246405

102589747

102600133

102602071

107827763

107804964

107819795

9269071

100276726

123154596

123161638

123411347

110436899

8067995

100836363

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	2	2	3	2	3	2	2	3	3	3	1	1	2	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7478703 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7478703 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**