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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478706   uncharacterized LOC7478706 
 ppo-r.4   7478706   uncharacterized LOC7478706 
 gma-u.5   100791167   VPS35 endosomal protein sorting factor-like 
 mtr-u.5   11432772   VPS35 endosomal protein sorting factor-like 
 ath-u.5   AT1G50730   uncharacterized protein 
 bra-r.6   103871321   VPS35 endosomal protein sorting factor-like 
 vvi-u.5   100245313   uncharacterized LOC100245313 
 ghi-r.1   107922310   VPS35 endosomal protein-sorting factor-like 
 ghi-r.1   107917809   VPS35 endosomal protein sorting factor-like 
 bna-r.1   125588701   VPS35 endosomal protein sorting factor-like 
 bna-r.1   125610089   VPS35 endosomal protein sorting factor-like 
 cit-r.1   102625721   uncharacterized LOC102625721 
 sly-u.5   101258921   uncharacterized LOC101258921 
 sot-r.1   102602146   UPF0505 protein C16orf62 homolog 
 nta-r.1   107766028   uncharacterized LOC107766028 
 nta-r.1   107813325   uncharacterized LOC107813325 

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Top 50 coexpressed genes to 7478706 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478706 (ppo-u.5 coexpression data)

CoexMap"7478706"


ppoLOC7478706 | Entrez gene ID : 7478706    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta cre hvu tae bdi osa zma sbi
Paralog 2 1 1 1 1 1 2 2 1 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032456 [list] [network] endocytic recycling  (6 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (204 genes)  IEA  
GO MF
Protein XP_024449189.2 [sequence] [blastp]
XP_024449193.2 [sequence] [blastp]
XP_024449198.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_024449189.2)
nucl 6,  cyto 1,  chlo 1,  plas 1,  vacu 1,  golg 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_024449193.2)
nucl 5,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_024449198.2)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for XP_024449189.2)
mito 8,  other 3  (predict for XP_024449193.2)
mito 8,  other 3  (predict for XP_024449198.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478706
ppo-r.4
for
7478706
gma-u.5
for
100791167
mtr-u.5
for
11432772
ath-u.5
for
AT1G50730
bra-r.6
for
103871321
vvi-u.5
for
100245313
ghi-r.1
for
107922310
ghi-r.1
for
107917809
bna-r.1
for
125588701
bna-r.1
for
125610089
cit-r.1
for
102625721
sly-u.5
for
101258921
sot-r.1
for
102602146
nta-r.1
for
107766028
nta-r.1
for
107813325


Ortholog ID: 13483
Species ppo gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta
Symbol LOC7478706 LOC100791167 LOC11432772 AT1G50730 LOC103871321 LOC100245313 LOC107922310 LOC107917809 LOC125588701 LOC125610089 LOC102625721 LOC101258921 LOC102602146 LOC107766028 LOC107813325
Function* uncharacterized LOC7478706 VPS35 endosomal protein sorting factor-like VPS35 endosomal protein sorting factor-like uncharacterized protein VPS35 endosomal protein sorting factor-like uncharacterized LOC100245313 VPS35 endosomal protein-sorting factor-like VPS35 endosomal protein sorting factor-like VPS35 endosomal protein sorting factor-like VPS35 endosomal protein sorting factor-like uncharacterized LOC102625721 uncharacterized LOC101258921 UPF0505 protein C16orf62 homolog uncharacterized LOC107766028 uncharacterized LOC107813325
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma04148 Efferocytosis 2
gma03250 Viral life cycle - HIV-1 2
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 3
ath00513 Various types of N-glycan biosynthesis 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03250 Viral life cycle - HIV-1 6
bra03083 Polycomb repressive complex 4
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7478706 100791167 11432772 841495 103871321 100245313 107922310 107917809 125588701 125610089 102625721 101258921 102602146 107766028 107813325
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