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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478915   40S ribosomal protein S4-2 
 ppo-r.4   7478915   40S ribosomal protein S4-2 
 ppo-m.4   7478915   40S ribosomal protein S4-2 
 ppo-u.5   7457756   40S ribosomal protein S4-1 
 ppo-u.5   7468069   40S ribosomal protein S4-3 
 ppo-u.5   18105576   40S ribosomal protein S4-1 
 gma-u.5   547645   40S ribosomal S4 protein 
 gma-u.5   100811336   40S ribosomal protein S4-1 
 gma-u.5   100801792   40S ribosomal protein S4 
 mtr-u.5   11407406   40S ribosomal protein S4-1 
 mtr-u.5   11407262   40S ribosomal protein S4-1 
 mtr-u.5   11412826   40S ribosomal protein S4-2 
 ath-u.5   AT2G17360   Ribosomal protein S4 (RPS4A) family protein 
 ath-u.5   AT5G07090   Ribosomal protein S4 (RPS4A) family protein 
 ath-u.5   AT5G58420   Ribosomal protein S4 (RPS4A) family protein 
 vvi-u.5   100262686   small ribosomal subunit protein eS4x 
 vvi-u.5   100263779   small ribosomal subunit protein eS4 
 vvi-u.5   100244922   small ribosomal subunit protein eS4z 
 sly-u.5   101251246   small ribosomal subunit protein eS4 
 sly-u.5   101246828   small ribosomal subunit protein eS4 
 sly-u.5   101251743   small ribosomal subunit protein eS4 
 osa-u.5   4338571   small ribosomal subunit protein eS4-like 
 osa-u.5   4328016   40S ribosomal protein S4-like 
 osa-u.5   4326022   small ribosomal subunit protein eS4-like 
 zma-u.5   103644306   40S ribosomal protein S4-like 
 zma-u.5   101027121   40S ribosomal protein S4 

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Top 50 coexpressed genes to 7478915 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478915 (ppo-u.5 coexpression data)

CoexMap"7478915"


ppoLOC7478915 | Entrez gene ID : 7478915    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 3 3 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (109 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_002318967.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  mito 3  (predict for XP_002318967.2)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_002318967.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478915

.
ppo-r.4
for
7478915

.
ppo-m.4
for
7478915

.
ppo-u.5
for
7457756

.
ppo-u.5
for
7468069

.
ppo-u.5
for
18105576

.
gma-u.5
for
547645

.
gma-u.5
for
100811336

.
gma-u.5
for
100801792

.
mtr-u.5
for
11407406

.
mtr-u.5
for
11407262

.
mtr-u.5
for
11412826

.
ath-u.5
for
AT2G17360

.
ath-u.5
for
AT5G07090

.
ath-u.5
for
AT5G58420

.
vvi-u.5
for
100262686

.
vvi-u.5
for
100263779

.
vvi-u.5
for
100244922

.
sly-u.5
for
101251246

.
sly-u.5
for
101246828

.
sly-u.5
for
101251743

.
osa-u.5
for
4338571

.
osa-u.5
for
4328016

.
osa-u.5
for
4326022

.
zma-u.5
for
103644306

.
zma-u.5
for
101027121

.


Ortholog ID: 1224
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi nta nta
Symbol AT2G17360 AT5G58420 LOC100801792 LOC100500000 LOC104645898 LOC101246828 LOC4328016 LOC4326022 LOC101027121 LOC103644306 LOC103856693 LOC103855714 LOC100262686 LOC100263779 LOC7468069 LOC7460394 LOC11407406 LOC11412826 LOC123112799 LOC123191404 LOC123425577 LOC107928593 LOC107943204 LOC106446095 LOC106420507 CHLRE_06g308250v5 LOC8079649 LOC8075349 LOC102587726 LOC102605939 LOC102612009 LOC102626610 LOC100846406 LOC107789333 LOC107786652
Function* Ribosomal protein S4 (RPS4A) family protein Ribosomal protein S4 (RPS4A) family protein 40S ribosomal protein S4 putative 40S ribosomal protein S4 small ribosomal subunit protein eS4 small ribosomal subunit protein eS4 40S ribosomal protein S4-like small ribosomal subunit protein eS4-like 40S ribosomal protein S4 40S ribosomal protein S4-like 40S ribosomal protein S4-2 40S ribosomal protein S4-1 small ribosomal subunit protein eS4x small ribosomal subunit protein eS4 40S ribosomal protein S4-3 40S ribosomal protein S4-3 40S ribosomal protein S4-1 40S ribosomal protein S4-2 40S ribosomal protein S4 40S ribosomal protein S4 40S ribosomal protein S4 40S ribosomal protein S4-like 40S ribosomal protein S4-like 40S ribosomal protein S4-1-like 40S ribosomal protein S4-1-like ribosomal protein S4 40S ribosomal protein S4 40S ribosomal protein S4 40S ribosomal protein S4-like 40S ribosomal protein S4-like 40S ribosomal protein S4-3 40S ribosomal protein S4-2 40S ribosomal protein S4 small ribosomal subunit protein eS4 small ribosomal subunit protein eS4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03008 Ribosome biogenesis in eukaryotes 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre00630 Glyoxylate and dicarboxylate metabolism 2
cre00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816243 835955 100801792 100500000 104645898 101246828 4328016 4326022 101027121 103644306 103856693 103855714 100262686 100263779 7468069 7460394 11407406 11412826 123112799 123191404 123425577 107928593 107943204 106446095 106420507 5716844 8079649 8075349 102587726 102605939 102612009 102626610 100846406 107789333 107786652
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