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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7479012   uncharacterized LOC7479012 
 ppo-r.4   7479012   uncharacterized LOC7479012 
 gma-u.5   100794290   eukaryotic translation initiation factor 2D 
 gma-u.5   100776835   eukaryotic translation initiation factor 2D 
 mtr-u.5   11431784   eukaryotic translation initiation factor 2D 
 ath-u.5   AT1G71350   eukaryotic translation initiation factor SUI1 family protein 
 vvi-u.5   100260152   uncharacterized LOC100260152 
 sly-u.5   101256449   uncharacterized LOC101256449 
 osa-u.5   4329675   eukaryotic translation initiation factor 2D 
 zma-u.5   103648685   eukaryotic translation initiation factor 2D 
 zma-u.5   100285176   uncharacterized LOC100285176 

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Top 50 coexpressed genes to 7479012 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7479012 (ppo-u.5 coexpression data)

CoexMap"7479012"


ppoLOC7479012 | Entrez gene ID : 7479012    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 2 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001731 [list] [network] formation of translation preinitiation complex  (12 genes)  IEA  
GO:0006413 [list] [network] translational initiation  (64 genes)  IEA  
GO CC
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (90 genes)  IEA  
Protein XP_024439549.1 [sequence] [blastp]
XP_024439550.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  pero 3,  nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_024439549.1)
cyto 4,  pero 3,  nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_024439550.1)
Subcellular
localization
TargetP
other 5  (predict for XP_024439549.1)
other 5  (predict for XP_024439550.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7479012

.
ppo-r.4
for
7479012

.
gma-u.5
for
100794290

.
gma-u.5
for
100776835

.
mtr-u.5
for
11431784

.
ath-u.5
for
AT1G71350

.
vvi-u.5
for
100260152

.
sly-u.5
for
101256449

.
osa-u.5
for
4329675

.
zma-u.5
for
103648685

.
zma-u.5
for
100285176

.


Ortholog ID: 9874
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G71350 LOC100776835 LOC100794290 LOC101256449 LOC4329675 LOC103648685 LOC100285176 LOC103831656 LOC100260152 LOC7479012 LOC11431784 LOC123151181 LOC123157141 LOC123442774 LOC107909141 LOC107928356 LOC106405889 LOC106354141 CHLRE_06g303650v5 LOC110434458 LOC102602849 LOC102621119 LOC100843082 LOC107789344 LOC107826328
Function* eukaryotic translation initiation factor SUI1 family protein eukaryotic translation initiation factor 2D eukaryotic translation initiation factor 2D uncharacterized LOC101256449 eukaryotic translation initiation factor 2D eukaryotic translation initiation factor 2D uncharacterized LOC100285176 eukaryotic translation initiation factor 2D uncharacterized LOC100260152 uncharacterized LOC7479012 eukaryotic translation initiation factor 2D eukaryotic translation initiation factor 2D eukaryotic translation initiation factor 2D eukaryotic translation initiation factor 2D-like eukaryotic translation initiation factor 2D eukaryotic translation initiation factor 2D eukaryotic translation initiation factor 2D-like eukaryotic translation initiation factor 2D uncharacterized protein eukaryotic translation initiation factor 2D eukaryotic translation initiation factor 2D uncharacterized LOC102621119 eukaryotic translation initiation factor 2D uncharacterized LOC107789344 uncharacterized LOC107826328
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
osa04141 Protein processing in endoplasmic reticulum 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843476 100776835 100794290 101256449 4329675 103648685 100285176 103831656 100260152 7479012 11431784 123151181 123157141 123442774 107909141 107928356 106405889 106354141 5716923 110434458 102602849 102621119 100843082 107789344 107826328
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