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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7479501   40S ribosomal protein S5 
 ppo-r.4   7479501   40S ribosomal protein S5 
 ppo-m.4   7479501   40S ribosomal protein S5 
 ppo-u.5   7488051   40S ribosomal protein S5 
 gma-u.5   100815850   40S ribosomal protein S5-like 
 gma-u.5   100803239   40S ribosomal protein S5 
 gma-u.5   100499758   uncharacterized LOC100499758 
 mtr-u.5   25483546   40S ribosomal protein S5 
 mtr-u.5   25499566   40S ribosomal protein S5 
 ath-u.5   RPS5B   ribosomal protein 5B 
 ath-u.5   RPS5A   ribosomal protein 5A 
 vvi-u.5   100243591   small ribosomal subunit protein uS7 
 vvi-u.5   100232926   small ribosomal subunit protein uS7 
 sly-u.5   101266690   small ribosomal subunit protein uS7 
 sly-u.5   101248251   small ribosomal subunit protein uS7 
 osa-u.5   4326457   small ribosomal subunit protein uS7 
 osa-u.5   4350516   small ribosomal subunit protein uS7 
 zma-u.5   100193240   40S ribosomal protein S5 
 zma-u.5   100193556   40S ribosomal protein S5-like 

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Top 50 coexpressed genes to 7479501 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7479501 (ppo-u.5 coexpression data)

CoexMap"7479501"


ppoLOC7479501 | Entrez gene ID : 7479501    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 3 2 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (34 genes)  IEA  
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (109 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (93 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (348 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002309278.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  cysk 1,  chlo 1,  nucl 1,  cysk_plas 1  (predict for XP_002309278.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002309278.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7479501

.
ppo-r.4
for
7479501

.
ppo-m.4
for
7479501

.
ppo-u.5
for
7488051

.
gma-u.5
for
100815850

.
gma-u.5
for
100803239

.
gma-u.5
for
100499758

.
mtr-u.5
for
25483546

.
mtr-u.5
for
25499566

.
ath-u.5
for
RPS5B

.
ath-u.5
for
RPS5A

.
vvi-u.5
for
100243591

.
vvi-u.5
for
100232926

.
sly-u.5
for
101266690

.
sly-u.5
for
101248251

.
osa-u.5
for
4326457

.
osa-u.5
for
4350516

.
zma-u.5
for
100193240

.
zma-u.5
for
100193556

.


Ortholog ID: 2137
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol RPS5B RPS5A LOC100499758 LOC100803239 LOC101266690 LOC101248251 LOC4350516 LOC4326457 LOC100193556 LOC100193240 LOC103845892 LOC103857673 LOC100243591 LOC100232926 LOC7488051 LOC7479501 LOC25483546 LOC25499566 LOC123060232 LOC123068729 LOC123442764 LOC107891217 LOC121220911 LOC111215106 LOC106351362 CHLRE_06g290950v5 LOC110433540 LOC102606169 LOC102597496 LOC102625543 LOC102622374 LOC100821763 LOC100833689 LOC107812918 LOC107812924
Function* ribosomal protein 5B ribosomal protein 5A uncharacterized LOC100499758 40S ribosomal protein S5 small ribosomal subunit protein uS7 small ribosomal subunit protein uS7 small ribosomal subunit protein uS7 small ribosomal subunit protein uS7 40S ribosomal protein S5-like 40S ribosomal protein S5 40S ribosomal protein S5-1 40S ribosomal protein S5-1 small ribosomal subunit protein uS7 small ribosomal subunit protein uS7 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5-1 40S ribosomal protein S5-1-like uncharacterized protein 40S ribosomal protein S5 40S ribosomal protein S5-like 40S ribosomal protein S5 40S ribosomal protein S5-like 40S ribosomal protein S5 40S ribosomal protein S5 40S ribosomal protein S5 small ribosomal subunit protein uS7-like small ribosomal subunit protein uS7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818304 820367 100499758 100803239 101266690 101248251 4350516 4326457 100193556 100193240 103845892 103857673 100243591 100232926 7488051 7479501 25483546 25499566 123060232 123068729 123442764 107891217 121220911 111215106 106351362 5721089 110433540 102606169 102597496 102625543 102622374 100821763 100833689 107812918 107812924
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