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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7480591   COBRA-like protein 4 
 ppo-r.4   7480591   COBRA-like protein 4 
 ppo-m.4   7480591   COBRA-like protein 4 
 ppo-u.5   7480590   COBRA-like protein 2 
 gma-u.5   100815779   protein COBRA 
 gma-u.5   100811581   protein COBRA 
 gma-u.5   100815926   protein COBRA 
 mtr-u.5   25495418   COBRA-like protein 1 
 mtr-u.5   25495419   protein COBRA 
 ath-u.5   COB   COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family 
 ath-u.5   COBL6   COBRA-like protein 6 precursor 
 ath-u.5   IRX6   COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family 
 vvi-u.5   100263436   protein COBRA 
 vvi-u.5   100263971   protein COBRA 
 sly-u.5   101260119   COBRA-like protein 4 
 sly-u.5   101260090   COBRA-like protein 6 
 sly-u.5   101253146   COBRA-like protein 4 
 osa-u.5   4333114   COBRA-like protein 5 
 osa-u.5   4338658   COBRA-like protein 3 
 zma-u.5   100037800   brittle stalk-2-like protein 7 
 zma-u.5   541793   brittle stalk-2-like protein 3 
 zma-u.5   778435   brittle stalk 2 

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Top 50 coexpressed genes to 7480591 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7480591 (ppo-u.5 coexpression data)

CoexMap"7480591"


ppoLOC7480591 | Entrez gene ID : 7480591    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0052324 [list] [network] plant-type cell wall cellulose biosynthetic process  (10 genes)  IEA  
GO:0010215 [list] [network] cellulose microfibril organization  (14 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (1125 genes)  IEA  
GO MF
Protein XP_002306058.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  golg_plas 3,  cyto_plas 3,  vacu 3,  cyto 1,  golg 1  (predict for XP_002306058.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_002306058.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7480591

.
ppo-r.4
for
7480591

.
ppo-m.4
for
7480591

.
ppo-u.5
for
7480590

.
gma-u.5
for
100815779

.
gma-u.5
for
100811581

.
gma-u.5
for
100815926

.
mtr-u.5
for
25495418

.
mtr-u.5
for
25495419

.
ath-u.5
for
COB

.
ath-u.5
for
COBL6

.
ath-u.5
for
IRX6

.
vvi-u.5
for
100263436

.
vvi-u.5
for
100263971

.
sly-u.5
for
101260119

.
sly-u.5
for
101260090

.
sly-u.5
for
101253146

.
osa-u.5
for
4333114

.
osa-u.5
for
4338658

.
zma-u.5
for
100037800

.
zma-u.5
for
541793

.
zma-u.5
for
778435

.


Ortholog ID: 307
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi bna bna sbi sot sot cit bdi nta nta
Symbol COB COBL6 LOC100782876 LOC100783410 COBRA-like LOC112940047 LOC4343844 LOC4343845 LOC541793 LOC100037798 LOC103856152 LOC100263436 LOC100263971 LOC7480590 LOC7480591 LOC25495418 LOC123105056 LOC123188006 LOC123447814 LOC123403280 LOC107951886 LOC106346245 LOC106399754 LOC8070042 LOC102598920 LOC102604326 LOC102609762 LOC100823628 LOC107807501 LOC107807502
Function* COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family COBRA-like protein 6 precursor protein COBRA-like COBRA-like protein 4-like protein COBRA-like COBRA-like protein 6 COBRA-like protein 1 COBRA-like protein 6 brittle stalk-2-like protein 3 brittle stalk-2-like protein 4 COBRA-like protein 4 protein COBRA protein COBRA COBRA-like protein 2 COBRA-like protein 4 COBRA-like protein 1 COBRA-like protein 3 COBRA-like protein 1 COBRA-like protein 2 COBRA-like protein 3 COBRA-like protein 1 COBRA-like protein 6 COBRA-like protein 2 COBRA-like protein 5 COBRA-like protein 4 COBRA-like protein 4 protein COBRA-like COBRA-like protein 1 protein COBRA-like COBRA-like protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00999 Biosynthesis of various plant secondary metabolites 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00051 Fructose and mannose metabolism 2
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836213 837508 100782876 100783410 101251844 112940047 4343844 4343845 541793 100037798 103856152 100263436 100263971 7480590 7480591 25495418 123105056 123188006 123447814 123403280 107951886 106346245 106399754 8070042 102598920 102604326 102609762 100823628 107807501 107807502
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