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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7484393   methyl-CpG-binding domain-containing protein 13 
 ppo-r.4   7484393   methyl-CpG-binding domain-containing protein 13 
 ppo-m.4   7484393   methyl-CpG-binding domain-containing protein 13 
 ppo-u.5   7454489   methyl-CpG-binding domain-containing protein 13 
 gma-u.5   102669254   methyl-CpG-binding domain-containing protein 13 
 ath-u.5   MBD13   methyl-CPG-binding domain protein 13 
 vvi-u.5   100263341   methyl-CpG-binding domain-containing protein 13 
 sly-u.5   101246025   methyl-CpG-binding domain-containing protein 13 
 osa-u.5   4335329   uncharacterized LOC4335329 
 zma-u.5   mbd113   methyl binding domain 113 

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Top 50 coexpressed genes to 7484393 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7484393 (ppo-u.5 coexpression data)

CoexMap"7484393"


ppoLOC7484393 | Entrez gene ID : 7484393    
Species ppo gma ath vvi sly osa zma tae mtr hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 4 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_002318826.2 [sequence] [blastp]
XP_024438436.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002318826.2)
nucl 9  (predict for XP_024438436.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002318826.2)
other 9  (predict for XP_024438436.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7484393

.
ppo-r.4
for
7484393

.
ppo-m.4
for
7484393

.
ppo-u.5
for
7454489

.
gma-u.5
for
102669254

.
ath-u.5
for
MBD13

.
vvi-u.5
for
100263341

.
sly-u.5
for
101246025

.
osa-u.5
for
4335329

.
zma-u.5
for
mbd113

.


Ortholog ID: 4991
Species ath gma sly zma bra vvi ppo ppo hvu ghi ghi bna sbi sot cit cit bdi nta nta
Symbol MBD13 LOC102669254 LOC101246025 mbd113 LOC103832554 LOC100263513 LOC7454489 LOC7484393 LOC123424566 LOC107947304 LOC107936902 LOC106347812 LOC8069424 LOC102605202 LOC102622266 LOC102629806 LOC100844950 LOC107787050 LOC107823238
Function* methyl-CPG-binding domain protein 13 methyl-CpG-binding domain-containing protein 13 methyl-CpG-binding domain-containing protein 13 methyl binding domain 113 methyl-CpG-binding domain-containing protein 13 uncharacterized LOC100263513 methyl-CpG-binding domain-containing protein 13 methyl-CpG-binding domain-containing protein 13 uncharacterized LOC123424566 methyl-CpG-binding domain-containing protein 13 methyl-CpG-binding domain-containing protein 13 methyl-CpG-binding domain-containing protein 13 uncharacterized LOC8069424 methyl-CpG-binding domain-containing protein 13 uncharacterized LOC102622266 methyl-CpG-binding domain-containing protein 13 uncharacterized LOC100844950 uncharacterized LOC107787050 uncharacterized LOC107823238
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly00280 Valine, leucine and isoleucine degradation 3
sly04016 MAPK signaling pathway - plant 2
sly00260 Glycine, serine and threonine metabolism 2
sly00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot00040 Pentose and glucuronate interconversions 2
sot00053 Ascorbate and aldarate metabolism 2
sot00561 Glycerolipid metabolism 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00062 Fatty acid elongation 2
nta01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00062 Fatty acid elongation 2
nta01040 Biosynthesis of unsaturated fatty acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835299 102669254 101246025 542207 103832554 100263513 7454489 7484393 123424566 107947304 107936902 106347812 8069424 102605202 102622266 102629806 100844950 107787050 107823238
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