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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7484665   AP-4 complex subunit sigma 
 ppo-r.4   7484665   AP-4 complex subunit sigma 
 ppo-m.4   7484665   AP-4 complex subunit sigma 
 gma-u.5   100779465   AP-4 complex subunit sigma 
 gma-u.5   100306047   uncharacterized LOC100306047 
 mtr-u.5   11441960   AP-4 complex subunit sigma 
 mtr-u.5   11415741   AP-4 complex subunit sigma 
 ath-u.5   AT2G19790   SNARE-like superfamily protein 
 vvi-u.5   100249106   AP-4 complex subunit sigma 
 sly-u.5   101264931   AP-4 complex subunit sigma 
 osa-u.5   4348463   AP-4 complex subunit sigma 
 osa-u.5   4345488   AP-4 complex subunit sigma 
 zma-u.5   100285322   uncharacterized LOC100285322 

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Top 50 coexpressed genes to 7484665 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7484665 (ppo-u.5 coexpression data)

CoexMap"7484665"


ppoLOC7484665 | Entrez gene ID : 7484665    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04142 [list] [network] Lysosome (97 genes)
GO BP
GO:0015031 [list] [network] protein transport  (471 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (540 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (6743 genes)  IEA  
GO MF
Protein XP_002308286.1 [sequence] [blastp]
XP_006381664.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto_mito 2,  cyto_nucl 2,  chlo 1,  nucl 1,  cyto 1,  plas 1  (predict for XP_002308286.1)
mito 4,  cyto_mito 2,  cyto_nucl 2,  chlo 1,  nucl 1,  cyto 1,  plas 1  (predict for XP_006381664.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for XP_002308286.1)
mito 8,  other 3  (predict for XP_006381664.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7484665

.
ppo-r.4
for
7484665

.
ppo-m.4
for
7484665

.
gma-u.5
for
100779465

.
gma-u.5
for
100306047

.
mtr-u.5
for
11441960

.
mtr-u.5
for
11415741

.
ath-u.5
for
AT2G19790

.
vvi-u.5
for
100249106

.
sly-u.5
for
101264931

.
osa-u.5
for
4348463

.
osa-u.5
for
4345488

.
zma-u.5
for
100285322

.


Ortholog ID: 6493
Species ath gma gma sly osa osa zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G19790 LOC100306047 LOC100779465 LOC101264931 LOC4348463 LOC4345488 LOC100285322 LOC103837983 LOC103828279 LOC100249106 LOC7484665 LOC11441960 LOC11415741 LOC123132214 LOC123143742 LOC123402718 LOC107893318 LOC107931994 LOC106376193 LOC106449232 CHLRE_07g330950v5 LOC8073520 LOC102605220 LOC102607536 LOC100834030 LOC107764602 LOC107786156
Function* SNARE-like superfamily protein uncharacterized LOC100306047 AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma uncharacterized LOC100285322 AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma-like AP-4 complex subunit sigma-like uncharacterized protein AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma AP-4 complex subunit sigma
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04142 Lysosome 4
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04142 Lysosome 3
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly00190 Oxidative phosphorylation 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 5
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 13
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 4
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 5
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 10
ppo04142 Lysosome 3
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 4
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
tae03440 Homologous recombination 3
tae04142 Lysosome 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04130 SNARE interactions in vesicular transport 4
bna00770 Pantothenate and CoA biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00770 Pantothenate and CoA biosynthesis 5
bna01240 Biosynthesis of cofactors 5
bna04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
sbi04142 Lysosome 2
sbi04144 Endocytosis 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 7
sot00190 Oxidative phosphorylation 2
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 5
bdi04142 Lysosome 2
bdi03060 Protein export 2
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta00190 Oxidative phosphorylation 3
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816498 100306047 100779465 101264931 4348463 4345488 100285322 103837983 103828279 100249106 7484665 11441960 11415741 123132214 123143742 123402718 107893318 107931994 106376193 106449232 5716165 8073520 102605220 102607536 100834030 107764602 107786156
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