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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485137   uncharacterized LOC7485137 
 ppo-r.4   7485137   uncharacterized LOC7485137 
 ppo-m.4   7485137   uncharacterized LOC7485137 
 gma-u.5   100799923   reticulon-4-interacting protein 1, mitochondrial 
 gma-u.5   100801185   reticulon-4-interacting protein 1 homolog, mitochondrial 
 mtr-u.5   25487286   reticulon-4-interacting protein 1, mitochondrial 
 ath-u.5   AT3G15090   GroES-like zinc-binding alcohol dehydrogenase family protein 
 vvi-u.5   100252024   uncharacterized LOC100252024 
 sly-u.5   101255066   uncharacterized LOC101255066 
 osa-u.5   4327011   uncharacterized LOC4327011 
 zma-u.5   100283093   reticulon-4-interacting protein 1 

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Top 50 coexpressed genes to 7485137 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485137 (ppo-u.5 coexpression data)

CoexMap"7485137"


ppoLOC7485137 | Entrez gene ID : 7485137    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (1602 genes)  IEA  
Protein XP_002300404.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 4,  cyto 1,  cyto_nucl 1,  chlo 1  (predict for XP_002300404.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_002300404.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485137

.
ppo-r.4
for
7485137

.
ppo-m.4
for
7485137

.
gma-u.5
for
100799923

.
gma-u.5
for
100801185

.
mtr-u.5
for
25487286

.
ath-u.5
for
AT3G15090

.
vvi-u.5
for
100252024

.
sly-u.5
for
101255066

.
osa-u.5
for
4327011

.
zma-u.5
for
100283093

.


Ortholog ID: 9477
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G15090 LOC100801185 LOC100799923 LOC101255066 LOC4327011 LOC100283093 LOC103869957 LOC103859608 LOC100252024 LOC7485137 LOC25487286 LOC123079194 LOC123062079 LOC123444430 LOC107939204 LOC111215703 LOC106397340 LOC8075589 LOC102581800 LOC102622188 LOC100840425 LOC107781234 LOC107829395
Function* GroES-like zinc-binding alcohol dehydrogenase family protein reticulon-4-interacting protein 1 homolog, mitochondrial reticulon-4-interacting protein 1, mitochondrial uncharacterized LOC101255066 uncharacterized LOC4327011 reticulon-4-interacting protein 1 reticulon-4-interacting protein 1, mitochondrial reticulon-4-interacting protein 1, mitochondrial uncharacterized LOC100252024 uncharacterized LOC7485137 reticulon-4-interacting protein 1, mitochondrial reticulon-4-interacting protein 1, mitochondrial reticulon-4-interacting protein 1, mitochondrial reticulon-4-interacting protein 1, mitochondrial reticulon-4-interacting protein 1 homolog, mitochondrial reticulon-4-interacting protein 1, mitochondrial-like reticulon-4-interacting protein 1, mitochondrial reticulon-4-interacting protein 1, mitochondrial reticulon-4-interacting protein 1, mitochondrial uncharacterized LOC102622188 reticulon-4-interacting protein 1, mitochondrial uncharacterized LOC107781234 uncharacterized LOC107829395
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath04712 Circadian rhythm - plant 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma01230 Biosynthesis of amino acids 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
zma00940 Phenylpropanoid biosynthesis 2
zma00941 Flavonoid biosynthesis 2
zma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00710 Carbon fixation by Calvin cycle 4
mtr01200 Carbon metabolism 4
mtr01230 Biosynthesis of amino acids 4
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820739 100801185 100799923 101255066 4327011 100283093 103869957 103859608 100252024 7485137 25487286 123079194 123062079 123444430 107939204 111215703 106397340 8075589 102581800 102622188 100840425 107781234 107829395
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