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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485271   putative GDP-L-fucose synthase 2 
 ppo-r.4   7485271   putative GDP-L-fucose synthase 2 
 ppo-u.5   7493369   putative GDP-L-fucose synthase 2 
 gma-u.5   100793356   putative GDP-L-fucose synthase 2 
 gma-u.5   100776301   putative GDP-L-fucose synthase 2-like 
 mtr-u.5   11442032   putative GDP-L-fucose synthase 2 
 ath-u.5   GER2   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-u.5   GER1   GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 
 vvi-u.5   100267310   putative GDP-L-fucose synthase 2 
 sly-u.5   101253202   putative GDP-L-fucose synthase 2 
 osa-u.5   4341699   probable GDP-L-fucose synthase 1 
 zma-u.5   100283867   GDP-L-fucose synthase 1 

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Top 50 coexpressed genes to 7485271 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485271 (ppo-u.5 coexpression data)

CoexMap"7485271"


ppoLOC7485271 | Entrez gene ID : 7485271    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00051 [list] [network] Fructose and mannose metabolism (73 genes)
pop00541 [list] [network] Biosynthesis of various nucleotide sugars (37 genes)
pop01250 [list] [network] Biosynthesis of nucleotide sugars (115 genes)
GO BP
GO:0009226 [list] [network] nucleotide-sugar biosynthetic process  (21 genes)  IEA  
GO CC
GO MF
GO:0050577 [list] [network] GDP-L-fucose synthase activity  (2 genes)  IEA  
Protein XP_002308425.1 [sequence] [blastp]
XP_024460304.1 [sequence] [blastp]
XP_024460305.1 [sequence] [blastp]
XP_024460306.1 [sequence] [blastp]
XP_024460307.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cyto_E.R. 4,  E.R._vacu 1,  chlo 1,  nucl 1,  plas 1,  E.R. 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_002308425.1)
cyto 6,  cyto_E.R. 4,  E.R._vacu 1,  chlo 1,  nucl 1,  plas 1,  E.R. 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_024460304.1)
cyto 6,  cyto_E.R. 4,  E.R._vacu 1,  chlo 1,  nucl 1,  plas 1,  E.R. 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_024460305.1)
cyto 6,  cyto_E.R. 4,  E.R._vacu 1,  chlo 1,  nucl 1,  plas 1,  E.R. 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_024460306.1)
cyto 6,  cyto_E.R. 4,  E.R._vacu 1,  chlo 1,  nucl 1,  plas 1,  E.R. 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_024460307.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002308425.1)
other 8  (predict for XP_024460304.1)
other 8  (predict for XP_024460305.1)
other 8  (predict for XP_024460306.1)
other 8  (predict for XP_024460307.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485271

.
ppo-r.4
for
7485271

.
ppo-u.5
for
7493369

.
gma-u.5
for
100793356

.
gma-u.5
for
100776301

.
mtr-u.5
for
11442032

.
ath-u.5
for
GER2

.
ath-u.5
for
GER1

.
vvi-u.5
for
100267310

.
sly-u.5
for
101253202

.
osa-u.5
for
4341699

.
zma-u.5
for
100283867

.


Ortholog ID: 8239
Species ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol GER1 GER2 LOC100793356 LOC100776301 LOC101253202 LOC4341699 LOC100283867 LOC103872568 LOC103831806 LOC100267310 LOC7485271 LOC7493369 LOC11442032 LOC123160084 LOC123166052 LOC123410203 LOC107907461 LOC107944887 LOC106427171 LOC111199314 LOC8058438 LOC102597056 LOC102624973 LOC100839279 LOC107831894 LOC107793042
Function* GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 NAD(P)-binding Rossmann-fold superfamily protein putative GDP-L-fucose synthase 2 putative GDP-L-fucose synthase 2-like putative GDP-L-fucose synthase 2 probable GDP-L-fucose synthase 1 GDP-L-fucose synthase 1 putative GDP-L-fucose synthase 2 GDP-L-fucose synthase 1 putative GDP-L-fucose synthase 2 putative GDP-L-fucose synthase 2 putative GDP-L-fucose synthase 2 putative GDP-L-fucose synthase 2 probable GDP-L-fucose synthase 1 probable GDP-L-fucose synthase 1 probable GDP-L-fucose synthase 1 GDP-L-fucose synthase 1 GDP-L-fucose synthase 1 putative GDP-L-fucose synthase 2 GDP-L-fucose synthase 1 probable GDP-L-fucose synthase 1 putative GDP-L-fucose synthase 2 putative GDP-L-fucose synthase 2 probable GDP-L-fucose synthase 1 putative GDP-L-fucose synthase 2 putative GDP-L-fucose synthase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00051 Fructose and mannose metabolism 2
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
ath04141 Protein processing in endoplasmic reticulum 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01250 Biosynthesis of nucleotide sugars 3
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 7
gma04145 Phagosome 7
gma00541 Biosynthesis of various nucleotide sugars 3
gma01250 Biosynthesis of nucleotide sugars 3
gma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 9
gma04517 IgSF CAM signaling 8
gma04814 Motor proteins 8
gma00051 Fructose and mannose metabolism 2
gma00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 3
sly04145 Phagosome 3
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01250 Biosynthesis of nucleotide sugars 5
osa00520 Amino sugar and nucleotide sugar metabolism 4
osa00541 Biosynthesis of various nucleotide sugars 3
osa00040 Pentose and glucuronate interconversions 2
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma00051 Fructose and mannose metabolism 2
zma00541 Biosynthesis of various nucleotide sugars 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 7
bra00510 N-Glycan biosynthesis 3
bra00513 Various types of N-glycan biosynthesis 3
bra01250 Biosynthesis of nucleotide sugars 2
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00514 Other types of O-glycan biosynthesis 2
bra04141 Protein processing in endoplasmic reticulum 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01250 Biosynthesis of nucleotide sugars 6
ppo00541 Biosynthesis of various nucleotide sugars 5
ppo00520 Amino sugar and nucleotide sugar metabolism 4
ppo01240 Biosynthesis of cofactors 4
ppo00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00020 Citrate cycle (TCA cycle) 6
mtr01200 Carbon metabolism 6
mtr01210 2-Oxocarboxylic acid metabolism 4
mtr03010 Ribosome 3
mtr01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 6
tae00020 Citrate cycle (TCA cycle) 3
tae01200 Carbon metabolism 3
tae03040 Spliceosome 2
tae00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 3
ghi00051 Fructose and mannose metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00051 Fructose and mannose metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 4
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00230 Purine metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 4
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00230 Purine metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
sbi00220 Arginine biosynthesis 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01210 2-Oxocarboxylic acid metabolism 3
sot00010 Glycolysis / Gluconeogenesis 2
sot00020 Citrate cycle (TCA cycle) 2
sot00620 Pyruvate metabolism 2
sot00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 5
cit03010 Ribosome 4
cit00290 Valine, leucine and isoleucine biosynthesis 2
cit00770 Pantothenate and CoA biosynthesis 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03050 Proteasome 3
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04142 Lysosome 2
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04142 Lysosome 2
nta00510 N-Glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843659 838368 100793356 100776301 101253202 4341699 100283867 103872568 103831806 100267310 7485271 7493369 11442032 123160084 123166052 123410203 107907461 107944887 106427171 111199314 8058438 102597056 102624973 100839279 107831894 107793042
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