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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485376   uncharacterized LOC7485376 
 ppo-r.4   7485376   uncharacterized LOC7485376 
 gma-u.5   100814757   aspartate-semialdehyde dehydrogenase 
 gma-u.5   100793061   aspartate-semialdehyde dehydrogenase 
 mtr-u.5   11415757   aspartate-semialdehyde dehydrogenase 
 ath-u.5   AT1G14810   semialdehyde dehydrogenase family protein 
 vvi-u.5   100245641   uncharacterized LOC100245641 
 sly-u.5   101258686   uncharacterized LOC101258686 
 osa-u.5   4334188   uncharacterized LOC4334188 
 zma-u.5   100191334   aspartate-semialdehyde dehydrogenase 

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Top 50 coexpressed genes to 7485376 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485376 (ppo-u.5 coexpression data)

CoexMap"7485376"


ppoLOC7485376 | Entrez gene ID : 7485376    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00260 [list] [network] Glycine, serine and threonine metabolism (86 genes)
pop00261 [list] [network] Monobactam biosynthesis (14 genes)
pop00270 [list] [network] Cysteine and methionine metabolism (144 genes)
pop00300 [list] [network] Lysine biosynthesis (18 genes)
pop01210 [list] [network] 2-Oxocarboxylic acid metabolism (97 genes)
pop01230 [list] [network] Biosynthesis of amino acids (287 genes)
GO BP
GO:0009088 [list] [network] threonine biosynthetic process  (2 genes)  IEA  
GO:0009097 [list] [network] isoleucine biosynthetic process  (10 genes)  IEA  
GO:0009089 [list] [network] lysine biosynthetic process via diaminopimelate  (13 genes)  IEA  
GO:0009086 [list] [network] methionine biosynthetic process  (23 genes)  IEA  
GO CC
GO MF
GO:0004073 [list] [network] aspartate-semialdehyde dehydrogenase activity  (2 genes)  IEA  
GO:0050661 [list] [network] NADP binding  (72 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (105 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (520 genes)  IEA  
Protein XP_002311534.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo_mito 5,  mito 5,  chlo 4  (predict for XP_002311534.1)
Subcellular
localization
TargetP
chlo 8,  mito 4  (predict for XP_002311534.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485376

.
ppo-r.4
for
7485376

.
gma-u.5
for
100814757

.
gma-u.5
for
100793061

.
mtr-u.5
for
11415757

.
ath-u.5
for
AT1G14810

.
vvi-u.5
for
100245641

.
sly-u.5
for
101258686

.
osa-u.5
for
4334188

.
zma-u.5
for
100191334

.


Ortholog ID: 7797
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G14810 LOC100814757 LOC100793061 LOC101258686 LOC4334188 LOC100191334 LOC103872275 LOC103836051 LOC100245641 LOC7485376 LOC11415757 LOC123105106 LOC123113398 LOC123452349 LOC107913502 LOC107920710 LOC106362122 LOC106346612 CHLRE_09g389689v5 LOC8085911 LOC102596301 LOC102608194 LOC100826805 LOC107820046 LOC107813234
Function* semialdehyde dehydrogenase family protein aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase uncharacterized LOC101258686 uncharacterized LOC4334188 aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase uncharacterized LOC100245641 uncharacterized LOC7485376 aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase-like uncharacterized protein aspartate-semialdehyde dehydrogenase aspartate-semialdehyde dehydrogenase uncharacterized LOC102608194 aspartate-semialdehyde dehydrogenase uncharacterized LOC107820046 uncharacterized LOC107813234
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 16
ath01210 2-Oxocarboxylic acid metabolism 9
ath00290 Valine, leucine and isoleucine biosynthesis 7
ath00770 Pantothenate and CoA biosynthesis 4
ath00220 Arginine biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 8
gma01200 Carbon metabolism 7
gma01230 Biosynthesis of amino acids 7
gma01210 2-Oxocarboxylic acid metabolism 6
gma00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 8
gma01200 Carbon metabolism 7
gma01230 Biosynthesis of amino acids 6
gma00010 Glycolysis / Gluconeogenesis 5
gma01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly01230 Biosynthesis of amino acids 4
sly00300 Lysine biosynthesis 3
sly00250 Alanine, aspartate and glutamate metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa00230 Purine metabolism 5
osa01230 Biosynthesis of amino acids 3
osa00250 Alanine, aspartate and glutamate metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03008 Ribosome biogenesis in eukaryotes 3
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
bra01230 Biosynthesis of amino acids 5
bra00300 Lysine biosynthesis 4
bra01210 2-Oxocarboxylic acid metabolism 3
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
bra00300 Lysine biosynthesis 3
bra01230 Biosynthesis of amino acids 3
bra00260 Glycine, serine and threonine metabolism 2
bra00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi01230 Biosynthesis of amino acids 5
vvi00260 Glycine, serine and threonine metabolism 2
vvi00300 Lysine biosynthesis 2
vvi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr01230 Biosynthesis of amino acids 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 8
tae00260 Glycine, serine and threonine metabolism 7
tae03010 Ribosome 6
tae01210 2-Oxocarboxylic acid metabolism 4
tae00750 Vitamin B6 metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae00260 Glycine, serine and threonine metabolism 4
tae01230 Biosynthesis of amino acids 4
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu00300 Lysine biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00261 Monobactam biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00261 Monobactam biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00261 Monobactam biosynthesis 4
bna00270 Cysteine and methionine metabolism 4
bna00300 Lysine biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00261 Monobactam biosynthesis 4
bna00270 Cysteine and methionine metabolism 4
bna00300 Lysine biosynthesis 4
bna01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 8
cre01210 2-Oxocarboxylic acid metabolism 4
cre00300 Lysine biosynthesis 4
cre03010 Ribosome 3
cre03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot01230 Biosynthesis of amino acids 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 4
cit03010 Ribosome 3
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi01200 Carbon metabolism 5
bdi00270 Cysteine and methionine metabolism 4
bdi00010 Glycolysis / Gluconeogenesis 4
bdi00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 8
nta01210 2-Oxocarboxylic acid metabolism 4
nta00220 Arginine biosynthesis 4
nta03010 Ribosome 3
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 7
nta01210 2-Oxocarboxylic acid metabolism 4
nta00220 Arginine biosynthesis 3
nta00250 Alanine, aspartate and glutamate metabolism 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838046 100814757 100793061 101258686 4334188 100191334 103872275 103836051 100245641 7485376 11415757 123105106 123113398 123452349 107913502 107920710 106362122 106346612 5720616 8085911 102596301 102608194 100826805 107820046 107813234
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