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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485608   protein FREE1 
 ppo-r.4   7485608   protein FREE1 
 ppo-m.4   7485608   protein FREE1 
 ppo-u.5   7490628   protein FREE1 
 gma-u.5   100779033   protein FREE1 
 gma-u.5   100794840   protein FREE1 
 gma-u.5   100788920   protein FREE1 
 mtr-u.5   11436682   protein FREE1 
 ath-u.5   AT1G20110   RING/FYVE/PHD zinc finger superfamily protein 
 vvi-u.5   100259195   protein FREE1 
 sly-u.5   101254660   protein FREE1-like 
 sly-u.5   101268468   protein FREE1 
 osa-u.5   4343683   protein FREE1 
 osa-u.5   4342097   protein FREE1 
 zma-u.5   100273158   uncharacterized LOC100273158 
 zma-u.5   100279323   putative RING/FYVE/PHD zinc finger family protein 

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Top 50 coexpressed genes to 7485608 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485608 (ppo-u.5 coexpression data)

CoexMap"7485608"


ppoLOC7485608 | Entrez gene ID : 7485608    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 1 1 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0036258 [list] [network] multivesicular body assembly  (2 genes)  IEA  
GO:0070676 [list] [network] intralumenal vesicle formation  (2 genes)  IEA  
GO CC
GO:0000813 [list] [network] ESCRT I complex  (11 genes)  IEA  
GO:0031902 [list] [network] late endosome membrane  (12 genes)  IEA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (80 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2135 genes)  IEA  
Protein XP_002306947.4 [sequence] [blastp]
XP_024457367.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002306947.4)
nucl 10  (predict for XP_024457367.2)
Subcellular
localization
TargetP
other 8  (predict for XP_002306947.4)
other 8  (predict for XP_024457367.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485608

.
ppo-r.4
for
7485608

.
ppo-m.4
for
7485608

.
ppo-u.5
for
7490628

.
gma-u.5
for
100779033

.
gma-u.5
for
100794840

.
gma-u.5
for
100788920

.
mtr-u.5
for
11436682

.
ath-u.5
for
AT1G20110

.
vvi-u.5
for
100259195

.
sly-u.5
for
101254660

.
sly-u.5
for
101268468

.
osa-u.5
for
4343683

.
osa-u.5
for
4342097

.
zma-u.5
for
100273158

.
zma-u.5
for
100279323

.


Ortholog ID: 5011
Species ath gma gma sly sly osa osa zma zma bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot sot cit bdi bdi nta nta
Symbol AT1G20110 LOC100779033 LOC121174816 LOC101254660 LOC101268468 LOC4342097 LOC4343683 LOC100273158 LOC100279323 LOC103835809 LOC100259195 LOC7490628 LOC7485608 LOC11436682 LOC542816 LOC123188084 LOC123425603 LOC123407753 LOC107910699 LOC107958208 LOC106440746 BNACNNG26830D LOC8055675 LOC102605585 LOC102586445 LOC102614530 LOC100823935 LOC100823962 LOC107792136 LOC107790430
Function* RING/FYVE/PHD zinc finger superfamily protein protein FREE1 protein FREE1-like protein FREE1-like protein FREE1 protein FREE1 protein FREE1 uncharacterized LOC100273158 putative RING/FYVE/PHD zinc finger family protein protein FREE1 protein FREE1 protein FREE1 protein FREE1 protein FREE1 protein FREE1 protein FREE1 protein FREE1-like protein FREE1-like protein FREE1 protein FREE1 protein FREE1 protein FREE1 protein FREE1 protein FREE1 protein FREE1-like protein FREE1 protein FREE1 protein FREE1 protein FREE1 protein FREE1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath03250 Viral life cycle - HIV-1 2
ath03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00380 Tryptophan metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
gma04016 MAPK signaling pathway - plant 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 3
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 5
bra04144 Endocytosis 3
bra03250 Viral life cycle - HIV-1 2
bra03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 8
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 7
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 4
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04136 Autophagy - other 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 5
sot03250 Viral life cycle - HIV-1 4
sot03272 Virion - Hepatitis viruses 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi04130 SNARE interactions in vesicular transport 2
bdi04145 Phagosome 2
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838600 100779033 121174816 101254660 101268468 4342097 4343683 100273158 100279323 103835809 100259195 7490628 7485608 11436682 542816 123188084 123425603 123407753 107910699 107958208 106440746 106431168 8055675 102605585 102586445 102614530 100823935 100823962 107792136 107790430
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