ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7485874	squamosa promoter-binding-like protein 6
ppo-r.4	7485874	squamosa promoter-binding-like protein 6
ppo-m.4	7485874	squamosa promoter-binding-like protein 6
ppo-u.5	7471071	squamosa promoter-binding-like protein 6
gma-u.5	100797372	squamosa promoter-binding-like protein 6
gma-u.5	100820149	squamosa promoter-binding-like protein 6
mtr-u.5	11426662	squamosa promoter-binding-like protein 6
vvi-u.5	100245772	squamosa promoter-binding-like protein 6
sly-u.5	101262615	squamosa promoter-binding-like protein 6

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(3662 genes)

IEA

GO MF

GO:0003677 [list] [network] DNA binding

(2205 genes)

IEA

Protein

XP_024467054.2 [sequence] [blastp]
XP_024467055.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_024467054.2)
nucl 10	(predict for XP_024467055.2)

Subcellular
localization
TargetP

other 8	(predict for XP_024467054.2)
other 9	(predict for XP_024467055.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7485874	ppo-r.4 for 7485874	ppo-m.4 for 7485874	ppo-u.5 for 7471071	gma-u.5 for 100797372	gma-u.5 for 100820149	mtr-u.5 for 11426662	vvi-u.5 for 100245772	sly-u.5 for 101262615

Ortholog ID: 13072

Species

ppo

gma

mtr

vvi

ghi

cit

sly

sot

nta

Symbol

Function^*

squamosa promoter-binding-like protein 6

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	2
ghi00230	Purine metabolism	2
ghi01232	Nucleotide metabolism	2
ghi00564	Glycerophospholipid metabolism	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	3
nta04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	3
nta00566	Sulfoquinovose metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

7485874

7471071

100820149

100797372

11426662

100245772

107893803

107898735

102619324

101262615

102588358

107827998

107820735

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7485874 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7485874 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	vvi	sly	bdi	hvu	bra	cit	bna	ath	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	4	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7485874 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7485874 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**