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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7487258   transcription factor AS1 
 ppo-r.4   7487258   transcription factor AS1 
 ppo-m.4   7487258   transcription factor AS1 
 ppo-u.5   18107400   protein rough sheath 2 homolog 
 gma-u.5   PHAN3   MYB/HD-like transcription factor 
 gma-u.5   PHANa   phantastica transcription factor a 
 gma-u.5   100809813   transcription factor AS1-like 
 mtr-u.5   11426301   transcription factor AS1 
 ath-u.5   AS1   myb-like HTH transcriptional regulator family protein 
 vvi-u.5   100256209   transcription factor AS1 
 vvi-u.5   100258292   transcription factor AS1 
 sly-u.5   543604   phantastica 
 osa-u.5   4352588   protein rough sheath 2 homolog 
 zma-u.5   542488   rough sheath 2 

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Top 50 coexpressed genes to 7487258 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487258 (ppo-u.5 coexpression data)

CoexMap"7487258"


ppoLOC7487258 | Entrez gene ID : 7487258    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002309060.3 [sequence] [blastp]
XP_052310234.1 [sequence] [blastp]
XP_052310235.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  plas 1,  pero 1  (predict for XP_002309060.3)
nucl 6,  cyto 2,  chlo 1,  plas 1,  pero 1  (predict for XP_052310234.1)
nucl 6,  cyto 2,  chlo 1,  plas 1,  pero 1  (predict for XP_052310235.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for XP_002309060.3)
mito 7,  other 3  (predict for XP_052310234.1)
mito 7,  other 3  (predict for XP_052310235.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7487258

.
ppo-r.4
for
7487258

.
ppo-m.4
for
7487258

.
ppo-u.5
for
18107400

.
gma-u.5
for
PHAN3

.
gma-u.5
for
PHANa

.
gma-u.5
for
100809813

.
mtr-u.5
for
11426301

.
ath-u.5
for
AS1

.
vvi-u.5
for
100256209

.
vvi-u.5
for
100258292

.
sly-u.5
for
543604

.
osa-u.5
for
4352588

.
zma-u.5
for
542488

.


Ortholog ID: 5482
Species ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol AS1 PHANb LOC100809813 LOC543604 LOC4352588 LOC542488 LOC103867176 LOC103857725 LOC100256209 LOC100258292 LOC18107400 LOC7487258 LOC11426301 LOC123110685 LOC100286389 LOC123395453 LOC107948901 LOC107899312 LOC106396482 LOC106392908 LOC8068109 LOC102603115 LOC102619220 LOC127900872 LOC100838645 LOC107829769 LOC107767574
Function* myb-like HTH transcriptional regulator family protein phantastica transcription factor b transcription factor AS1-like phantastica protein rough sheath 2 homolog rough sheath 2 transcription factor AS1 transcription factor AS1 transcription factor AS1 transcription factor AS1 protein rough sheath 2 homolog transcription factor AS1 transcription factor AS1 protein rough sheath 2 protein rough sheath 2 protein rough sheath 2 homolog transcription factor AS1 transcription factor AS1 transcription factor AS1 transcription factor AS1-like protein rough sheath 2 transcription factor AS1 transcription factor AS1 transcription factor AS1-like protein rough sheath 2 transcription factor AS1-like transcription factor AS1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04145 Phagosome 2
tae04517 IgSF CAM signaling 2
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04145 Phagosome 2
tae04517 IgSF CAM signaling 2
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818340 100101908 100809813 543604 4352588 542488 103867176 103857725 100256209 100258292 18107400 7487258 11426301 123110685 100286389 123395453 107948901 107899312 106396482 106392908 8068109 102603115 102619220 127900872 100838645 107829769 107767574
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