ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7488359	uncharacterized LOC7488359
ppo-r.4	7488359	uncharacterized LOC7488359
ppo-m.4	7488359	uncharacterized LOC7488359
ppo-u.5	7477425	uncharacterized LOC7477425
ppo-u.5	7487073	uncharacterized LOC7487073
ppo-u.5	7475589	uncharacterized LOC7475589
gma-u.5	100776729	uncharacterized LOC100776729
gma-u.5	100818595	uncharacterized LOC100818595
gma-u.5	100527343	uncharacterized LOC100527343
mtr-u.5	25485491	uncharacterized LOC25485491
mtr-u.5	11426069	uncharacterized LOC11426069
ath-u.5	AT3G02555	uncharacterized protein
ath-u.5	AT5G16110	uncharacterized protein
ath-u.5	AT1G13390	translocase subunit seca
bra-r.6	103871934	uncharacterized LOC103871934
bra-r.6	103870905	uncharacterized LOC103870905
bra-r.6	103856181	uncharacterized LOC103856181
vvi-u.5	100251510	uncharacterized LOC100251510
vvi-u.5	100266248	uncharacterized LOC100266248
vvi-u.5	100262793	uncharacterized LOC100262793
ghi-r.1	107952824	uncharacterized LOC107952824
ghi-r.1	107899617	uncharacterized LOC107899617
bna-r.1	125610183	uncharacterized LOC125610183
bna-r.1	106441493	uncharacterized LOC106441493
bna-r.1	125606965	uncharacterized LOC125606965
cit-r.1	102627691	uncharacterized LOC102627691
cit-r.1	102618664	hypothetical protein
sly-u.5	101254996	uncharacterized LOC101254996
sly-u.5	101256848	uncharacterized LOC101256848
sly-u.5	101268114	uncharacterized LOC101268114
sot-r.1	102601407	uncharacterized LOC102601407
sot-r.1	102595281	uncharacterized LOC102595281
sot-r.1	102594284	uncharacterized LOC102594284
nta-r.1	107762383	uncharacterized LOC107762383
nta-r.1	107762641	uncharacterized LOC107762641
nta-r.1	107766568	uncharacterized LOC107766568
osa-u.5	9271366	uncharacterized LOC9271366
zma-u.5	103633253	uncharacterized LOC103633253
zma-u.5	103650465	uncharacterized LOC103650465
tae-r.2	123102309	uncharacterized LOC123102309
tae-r.2	123110490	uncharacterized LOC123110490
tae-r.2	123119488	SH3 domain-containing protein C23A1.17
hvu-r.1	123451922	unconventional myosin-XVI-like
sbi-r.1	8076644	translation initiation factor IF-2
bdi-r.1	100843912	uncharacterized LOC100843912

Top 50 coexpressed genes to 7488359 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7488359 (ppo-u.5 coexpression data)

CoexMap"7488359"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002312400.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto_nucl 4, cyto 1

(predict for XP_002312400.1)

Subcellular
localization
TargetP

chlo 7, other 3

(predict for XP_002312400.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7488359	ppo-r.4 for 7488359	ppo-m.4 for 7488359	ppo-u.5 for 7477425	ppo-u.5 for 7487073	ppo-u.5 for 7475589	gma-u.5 for 100776729	gma-u.5 for 100818595	gma-u.5 for 100527343	mtr-u.5 for 25485491	mtr-u.5 for 11426069	ath-u.5 for AT3G02555	ath-u.5 for AT5G16110	ath-u.5 for AT1G13390	bra-r.6 for 103871934	bra-r.6 for 103870905	bra-r.6 for 103856181	vvi-u.5 for 100251510	vvi-u.5 for 100266248	vvi-u.5 for 100262793	ghi-r.1 for 107952824	ghi-r.1 for 107899617	bna-r.1 for 125610183	bna-r.1 for 106441493	bna-r.1 for 125606965	cit-r.1 for 102627691	cit-r.1 for 102618664	sly-u.5 for 101254996	sly-u.5 for 101256848	sly-u.5 for 101268114	sot-r.1 for 102601407	sot-r.1 for 102595281	sot-r.1 for 102594284	nta-r.1 for 107762383	nta-r.1 for 107762641	nta-r.1 for 107766568	osa-u.5 for 9271366	zma-u.5 for 103633253	zma-u.5 for 103650465	tae-r.2 for 123102309	tae-r.2 for 123110490	tae-r.2 for 123119488	hvu-r.1 for 123451922	sbi-r.1 for 8076644	bdi-r.1 for 100843912

Ortholog

Ortholog ID: 620

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7488359

uncharacterized LOC7487073

uncharacterized LOC18099495

uncharacterized LOC100776729

uncharacterized LOC100306293

uncharacterized LOC100788286

uncharacterized LOC25485491

uncharacterized LOC11426069

uncharacterized LOC11422535

uncharacterized protein

translocase subunit seca

uncharacterized LOC103856181

uncharacterized LOC103858969

uncharacterized LOC103843361

uncharacterized LOC100251510

uncharacterized LOC100266248

uncharacterized LOC100262793

uncharacterized LOC107942923

uncharacterized LOC107912729

uncharacterized LOC107886636

uncharacterized LOC125601543

uncharacterized LOC106397192

uncharacterized LOC106364420

uncharacterized LOC102627691

hypothetical protein

uncharacterized LOC101254996

uncharacterized LOC101258832

uncharacterized LOC101263203

uncharacterized LOC102605157

uncharacterized LOC102582300

uncharacterized LOC102582373

uncharacterized LOC107766568

uncharacterized LOC107799347

uncharacterized LOC107816458

uncharacterized LOC9271366

uncharacterized LOC103633253

uncharacterized LOC103650465

uncharacterized LOC123102309

uncharacterized LOC123110490

SH3 domain-containing protein C23A1.17

unconventional myosin-XVI-like

translation initiation factor IF-2

uncharacterized LOC100843912

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2
ath00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	6
sly04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00760	Nicotinate and nicotinamide metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03250	Viral life cycle - HIV-1	2
sbi03272	Virion - Hepatitis viruses	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	5
bdi04145	Phagosome	3
bdi04142	Lysosome	2
bdi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

7488359

7487073

18099495

100776729

100306293

100788286

25485491

11426069

11422535

820627

837899

843178

103856181

103858969

103843361

100251510

100266248

100262793

107942923

107912729

107886636

125601543

106397192

106364420

102627691

102618664

101254996

101258832

101263203

102605157

102582300

102582373

107766568

107799347

107816458

9271366

103633253

103650465

123102309

123110490

123119488

123451922

8076644

100843912

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	2	3	3	3	2	3	2	3	3	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7488359 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7488359 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**