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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7488381   origin of replication complex subunit 4 
 gma-u.5   100800582   origin of replication complex subunit 4 
 mtr-u.5   25485446   origin of replication complex subunit 4 
 ath-u.5   ORC4   origin recognition complex subunit 4 
 vvi-u.5   100249124   origin of replication complex subunit 4 
 sly-u.5   101264215   origin of replication complex subunit 4 
 osa-u.5   4324139   origin of replication complex subunit 4-like 
 zma-u.5   541939   origin recognition complex subunit 4 

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Top 50 coexpressed genes to 7488381 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7488381 (ppo-m.4 coexpression data)

CoexMap"7488381"


ppoLOC7488381 | Entrez gene ID : 7488381    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006270 [list] [network] DNA replication initiation  (21 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (144 genes)  IEA  
GO CC
GO:0005664 [list] [network] nuclear origin of replication recognition complex  (6 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0003688 [list] [network] DNA replication origin binding  (11 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (550 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002312422.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_002312422.2)
Subcellular
localization
TargetP
other 6  (predict for XP_002312422.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7488381

.
gma-u.5
for
100800582

.
mtr-u.5
for
25485446

.
ath-u.5
for
ORC4

.
vvi-u.5
for
100249124

.
sly-u.5
for
101264215

.
osa-u.5
for
4324139

.
zma-u.5
for
541939

.


Ortholog ID: 8857
Species ath gma sly osa zma bra vvi mtr tae hvu ghi ghi cre sbi bdi nta
Symbol ORC4 LOC100800582 LOC101264215 LOC4324139 LOC541939 LOC103827604 LOC100249124 LOC25485446 LOC123078959 LOC123444129 LOC107935512 LOC107935553 CHLRE_17g726500v5 LOC8063067 LOC100842039 LOC107784473
Function* origin recognition complex subunit 4 origin of replication complex subunit 4 origin of replication complex subunit 4 origin of replication complex subunit 4-like origin recognition complex subunit 4 origin of replication complex subunit 4 origin of replication complex subunit 4 origin of replication complex subunit 4 origin of replication complex subunit 4 origin of replication complex subunit 4 origin of replication complex subunit 4 origin of replication complex subunit 4 uncharacterized protein origin of replication complex subunit 4 origin of replication complex subunit 4 origin of replication complex subunit 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03410 Base excision repair 6
ath03420 Nucleotide excision repair 5
ath03430 Mismatch repair 5
ath03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 11
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 3
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 7
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 9
mtr03420 Nucleotide excision repair 3
mtr03430 Mismatch repair 3
mtr03440 Homologous recombination 2
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 6
ghi03460 Fanconi anemia pathway 4
ghi04814 Motor proteins 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03030 DNA replication 3
ghi04814 Motor proteins 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03420 Nucleotide excision repair 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 3
nta03018 RNA degradation 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814641 100800582 101264215 4324139 541939 103827604 100249124 25485446 123078959 123444129 107935512 107935553 5722793 8063067 100842039 107784473
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