ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7488400	serine carboxypeptidase-like 50
ppo-r.4	7488400	serine carboxypeptidase-like 50
ppo-u.5	7488399	serine carboxypeptidase-like 50
ppo-u.5	18099030	serine carboxypeptidase-like 50
gma-u.5	100780822	serine carboxypeptidase-like 50
gma-u.5	100777309	serine carboxypeptidase-like 50
gma-u.5	100787236	serine carboxypeptidase-like 50
mtr-u.5	11430919	putative carboxypeptidase C
mtr-u.5	25493004	putative carboxypeptidase C
bra-r.6	103843176	serine carboxypeptidase-like 50
bra-r.6	103872291	serine carboxypeptidase-like 50
vvi-u.5	100257846	serine carboxypeptidase-like 50
vvi-u.5	100247506	serine carboxypeptidase-like 50
ghi-r.1	107931937	serine carboxypeptidase-like 50
ghi-r.1	107909915	serine carboxypeptidase-like 50
bna-r.1	106411884	serine carboxypeptidase-like 50
bna-r.1	106439970	serine carboxypeptidase-like 50
bna-r.1	106364547	serine carboxypeptidase-like 50
cit-r.1	102607113	serine carboxypeptidase-like 50
sly-u.5	101250043	serine carboxypeptidase-like 50
sot-r.1	102592860	serine carboxypeptidase-like 50
sot-r.1	102582110	serine carboxypeptidase-like 50
nta-r.1	107778307	serine carboxypeptidase-like 50
nta-r.1	107770482	serine carboxypeptidase-like 50
nta-r.1	107778313	serine carboxypeptidase-like 50
osa-u.5	4326667	serine carboxypeptidase-like 50
osa-u.5	4339736	serine carboxypeptidase-like 50
osa-u.5	4339737	serine carboxypeptidase-like 50
zma-u.5	103652719	serine carboxypeptidase-like 50
zma-u.5	100382387	uncharacterized LOC100382387
tae-r.2	123182510	serine carboxypeptidase-like 50
tae-r.2	123100127	serine carboxypeptidase-like 50
tae-r.2	123100177	serine carboxypeptidase-like 50
hvu-r.1	123429248	serine carboxypeptidase-like 50
hvu-r.1	123420811	serine carboxypeptidase-like 50
hvu-r.1	123420767	serine carboxypeptidase-like 50
sbi-r.1	8064741	serine carboxypeptidase-like 50
sbi-r.1	8083815	serine carboxypeptidase-like 50
bdi-r.1	100826536	serine carboxypeptidase-like 50
cre-r.1	CHLRE_02g116500v5	uncharacterized protein
cre-r.1	CHLRE_01g011300v5	uncharacterized protein

Top 50 coexpressed genes to 7488400 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7488400 (ppo-u.5 coexpression data)

CoexMap"7488400"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006508 [list] [network] proteolysis

(879 genes)

IEA

GO CC

GO MF

GO:0004185 [list] [network] serine-type carboxypeptidase activity

(44 genes)

IEA

Protein

XP_002312440.4 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, extr 2, nucl 1, cyto 1, E.R. 1, cyto_nucl 1, chlo_mito 1, cyto_E.R. 1

(predict for XP_002312440.4)

Subcellular
localization
TargetP

scret 9

(predict for XP_002312440.4)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7488400	ppo-r.4 for 7488400	ppo-u.5 for 7488399	ppo-u.5 for 18099030	gma-u.5 for 100780822	gma-u.5 for 100777309	gma-u.5 for 100787236	mtr-u.5 for 11430919	mtr-u.5 for 25493004	bra-r.6 for 103843176	bra-r.6 for 103872291	vvi-u.5 for 100257846	vvi-u.5 for 100247506	ghi-r.1 for 107931937	ghi-r.1 for 107909915	bna-r.1 for 106411884	bna-r.1 for 106439970	bna-r.1 for 106364547	cit-r.1 for 102607113	sly-u.5 for 101250043	sot-r.1 for 102592860	sot-r.1 for 102582110	nta-r.1 for 107778307	nta-r.1 for 107770482	nta-r.1 for 107778313	osa-u.5 for 4326667	osa-u.5 for 4339736	osa-u.5 for 4339737	zma-u.5 for 103652719	zma-u.5 for 100382387	tae-r.2 for 123182510	tae-r.2 for 123100127	tae-r.2 for 123100177	hvu-r.1 for 123429248	hvu-r.1 for 123420811	hvu-r.1 for 123420767	sbi-r.1 for 8064741	sbi-r.1 for 8083815	bdi-r.1 for 100826536	cre-r.1 for CHLRE_02g116500v5	cre-r.1 for CHLRE_01g011300v5

Ortholog

Ortholog ID: 2677

Species

ppo

gma

mtr

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

serine carboxypeptidase-like 50

putative carboxypeptidase C

serine carboxypeptidase-like 50

uncharacterized LOC100382387

serine carboxypeptidase-like 50

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	2
ppo03083	Polycomb repressive complex	2
ppo04120	Ubiquitin mediated proteolysis	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00900	Terpenoid backbone biosynthesis	10
gma00280	Valine, leucine and isoleucine degradation	3
gma00650	Butanoate metabolism	3
gma00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	8
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01230	Biosynthesis of amino acids	6
bra00400	Phenylalanine, tyrosine and tryptophan biosynthesis	4
bra00562	Inositol phosphate metabolism	2
bra00920	Sulfur metabolism	2
bra04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	5
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	9
vvi04145	Phagosome	3
vvi03060	Protein export	2
vvi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03083	Polycomb repressive complex	2
ghi00600	Sphingolipid metabolism	2
ghi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00600	Sphingolipid metabolism	2
ghi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
ghi01230	Biosynthesis of amino acids	2
ghi03083	Polycomb repressive complex	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	3
cit04075	Plant hormone signal transduction	3
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	4
nta00566	Sulfoquinovose metabolism	4
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	4
nta00566	Sulfoquinovose metabolism	4
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	4
nta00566	Sulfoquinovose metabolism	4
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma04016	MAPK signaling pathway - plant	2
zma04075	Plant hormone signal transduction	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
tae00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

7488400

7488399

18099030

100780822

100787236

100781899

11430919

25493004

103843176

103872291

100257846

100247506

107931937

107909915

106439970

106439974

106377054

102607113

101250043

102592860

102582110

107778307

107770482

107778313

4326667

4339736

4339737

103652719

100382387

123100177

123182613

123051280

123429248

123420811

123420767

8064741

8083815

100826536

5725195

5715029

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	ath
Paralog	4	3	2	2	2	2	3	1	1	2	3	3	2	3	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7488400 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7488400 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**