ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7488602	uncharacterized LOC7488602
ppo-r.4	7488602	uncharacterized LOC7488602
ppo-u.5	7466316	protein PXR1
gma-u.5	100816092	uncharacterized LOC100816092
gma-u.5	100800534	MAP7 domain-containing protein 2
mtr-u.5	11439503	ensconsin
ath-u.5	AT2G31410	coiled-coil protein
bra-r.6	103865139	uncharacterized LOC103865139
bra-r.6	103857372	uncharacterized LOC103857372
vvi-u.5	100254991	uncharacterized LOC100254991
ghi-r.1	107934918	MAP7 domain-containing protein 2
ghi-r.1	107935844	MAP7 domain-containing protein 2
bna-r.1	BNAC04G42380D	uncharacterized BNAC04G42380D
bna-r.1	106448082	nucleolar protein 58-like
bna-r.1	106437744	uncharacterized LOC106437744
cit-r.1	102621623	uncharacterized LOC102621623
sly-u.5	101259008	rRNA-processing protein CGR1
sot-r.1	102588941	rRNA-processing protein CGR1
nta-r.1	107779607	uncharacterized LOC107779607
nta-r.1	107811804	uncharacterized LOC107811804
osa-u.5	4329857	uncharacterized LOC4329857
zma-u.5	100277318	uncharacterized LOC100277318
zma-u.5	100277796	uncharacterized LOC100277796
tae-r.2	123144693	uncharacterized LOC123144693
tae-r.2	123137327	uncharacterized LOC123137327
tae-r.2	123127590	uncharacterized LOC123127590
hvu-r.1	123401454	coiled-coil domain-containing protein 86
sbi-r.1	8056474	uncharacterized LOC8056474
bdi-r.1	100829319	coiled-coil domain-containing protein 86

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005730 [list] [network] nucleolus

(220 genes)

IEA

GO MF

Protein

XP_002301757.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, mito 1

(predict for XP_002301757.2)

Subcellular
localization
TargetP

other 8

(predict for XP_002301757.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7488602	ppo-r.4 for 7488602	ppo-u.5 for 7466316	gma-u.5 for 100816092	gma-u.5 for 100800534	mtr-u.5 for 11439503	ath-u.5 for AT2G31410	bra-r.6 for 103865139	bra-r.6 for 103857372	vvi-u.5 for 100254991	ghi-r.1 for 107934918	ghi-r.1 for 107935844	bna-r.1 for BNAC04G42380D	bna-r.1 for 106448082	bna-r.1 for 106437744	cit-r.1 for 102621623	sly-u.5 for 101259008	sot-r.1 for 102588941	nta-r.1 for 107779607	nta-r.1 for 107811804	osa-u.5 for 4329857	zma-u.5 for 100277318	zma-u.5 for 100277796	tae-r.2 for 123144693	tae-r.2 for 123137327	tae-r.2 for 123127590	hvu-r.1 for 123401454	sbi-r.1 for 8056474	bdi-r.1 for 100829319

Ortholog

Ortholog ID: 7936

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7488602

protein PXR1

uncharacterized LOC100816092

MAP7 domain-containing protein 2

ensconsin

coiled-coil protein

uncharacterized LOC103865139

uncharacterized LOC103857372

uncharacterized LOC100254991

MAP7 domain-containing protein 2

uncharacterized BNAC04G42380D

uncharacterized LOC106437744

uncharacterized LOC106447025

uncharacterized LOC102621623

rRNA-processing protein CGR1

uncharacterized LOC107779607

uncharacterized LOC107811804

uncharacterized LOC4329857

uncharacterized LOC100277318

uncharacterized LOC100277796

uncharacterized LOC123144693

uncharacterized LOC123137327

uncharacterized LOC123127590

coiled-coil domain-containing protein 86

uncharacterized LOC8056474

coiled-coil domain-containing protein 86

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	7
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	8
ppo03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	3
gma03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	11
mtr03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	4
bra03008	Ribosome biogenesis in eukaryotes	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	5
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	3
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	5
sbi00030	Pentose phosphate pathway	2
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	4

Expression

Expression pattern

Entrez Gene ID^*

7488602

7466316

100816092

100800534

11439503

817699

103865139

103857372

100254991

107934918

107935844

106433105

106437744

106447025

102621623

101259008

102588941

107779607

107811804

4329857

100277318

100277796

123144693

123137327

123127590

123401454

8056474

100829319

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7488602 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7488602 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	1	1	2	1	2	3	1	1	1	2	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7488602 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7488602 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**