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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7489484   40S ribosomal protein S11 
 ppo-r.4   7489484   40S ribosomal protein S11 
 ppo-m.4   7489484   40S ribosomal protein S11 
 ppo-u.5   7483812   40S ribosomal protein S11 
 ppo-u.5   18105113   40S ribosomal protein S11 
 gma-u.5   100500094   uncharacterized LOC100500094 
 gma-u.5   100784140   40S ribosomal protein S11 
 gma-u.5   100500186   40S ribosomal protein S11 
 mtr-u.5   11446689   40S ribosomal protein S11 
 mtr-u.5   11420369   40S ribosomal protein S11 
 mtr-u.5   11408171   40S ribosomal protein S11 
 ath-u.5   EMB1080   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   AT4G30800   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   RPS11-BETA   ribosomal protein S11-beta 
 vvi-u.5   100265421   small ribosomal subunit protein uS17 
 vvi-u.5   100244095   small ribosomal subunit protein uS17 
 sly-u.5   101249995   small ribosomal subunit protein uS17 
 sly-u.5   101265738   small ribosomal subunit protein uS17 
 sly-u.5   101266035   small ribosomal subunit protein uS17 
 osa-u.5   9271697   small ribosomal subunit protein uS17 
 osa-u.5   4344935   small ribosomal subunit protein uS17 
 osa-u.5   4343620   small ribosomal subunit protein uS17 
 zma-u.5   100280559   40S ribosomal protein S11 
 zma-u.5   110485086   40S ribosomal protein S11 
 zma-u.5   542552   40S ribosomal protein S11 

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Top 50 coexpressed genes to 7489484 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7489484 (ppo-u.5 coexpression data)

CoexMap"7489484"


ppoLOC7489484 | Entrez gene ID : 7489484    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (109 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002325170.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  cysk 1  (predict for XP_002325170.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002325170.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7489484

.
ppo-r.4
for
7489484

.
ppo-m.4
for
7489484

.
ppo-u.5
for
7483812

.
ppo-u.5
for
18105113

.
gma-u.5
for
100500094

.
gma-u.5
for
100784140

.
gma-u.5
for
100500186

.
mtr-u.5
for
11446689

.
mtr-u.5
for
11420369

.
mtr-u.5
for
11408171

.
ath-u.5
for
EMB1080

.
ath-u.5
for
AT4G30800

.
ath-u.5
for
RPS11-BETA

.
vvi-u.5
for
100265421

.
vvi-u.5
for
100244095

.
sly-u.5
for
101249995

.
sly-u.5
for
101265738

.
sly-u.5
for
101266035

.
osa-u.5
for
9271697

.
osa-u.5
for
4344935

.
osa-u.5
for
4343620

.
zma-u.5
for
100280559

.
zma-u.5
for
110485086

.
zma-u.5
for
542552

.


Ortholog ID: 1545
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT4G30800 RPS11-BETA LOC100784140 LOC100500094 LOC101265738 LOC101266035 LOC4343620 LOC4336975 LOC542552 LOC110485086 LOC103854885 LOC103865640 LOC100244095 LOC100265421 LOC18105113 LOC7483812 LOC11408171 LOC11446689 LOC123046457 LOC123427621 LOC123403960 LOC121225242 LOC107916092 LOC106447872 LOC106348308 CHLRE_12g514500v5 LOC8059678 LOC8075895 LOC102593567 LOC102584890 LOC102609988 LOC100832014 LOC100824210 LOC107799813 LOC107785006
Function* Nucleic acid-binding, OB-fold-like protein ribosomal protein S11-beta 40S ribosomal protein S11 uncharacterized LOC100500094 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11-3 40S ribosomal protein S11-3 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11-like 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11-3 40S ribosomal protein S11-3 ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae03040 Spliceosome 4
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829203 832439 100784140 100500094 101265738 101266035 4343620 4336975 542552 110485086 103854885 103865640 100244095 100265421 18105113 7483812 11408171 11446689 123046457 123427621 123403960 121225242 107916092 106447872 106348308 5728549 8059678 8075895 102593567 102584890 102609988 100832014 100824210 107799813 107785006
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