ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7489727	uncharacterized LOC7489727
ppo-r.4	7489727	uncharacterized LOC7489727
ppo-m.4	7489727	uncharacterized LOC7489727
gma-u.5	100777538	uncharacterized LOC100777538
gma-u.5	100794305	uncharacterized LOC100794305
mtr-u.5	120577419	uncharacterized LOC120577419
ath-u.5	AT5G66810	Ran-binding protein in the microtubule-organising centre protein
vvi-u.5	100244129	uncharacterized LOC100244129
sly-u.5	101246489	uncharacterized LOC101246489
osa-u.5	4348507	uncharacterized LOC4348507
zma-u.5	100383390	uncharacterized LOC100383390

functional annotation

KEGG

GO BP

GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process

(182 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus	(3662 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(6111 genes)	IEA

GO MF

Protein

XP_024457761.2 [sequence] [blastp]
XP_024457762.2 [sequence] [blastp]
XP_052309244.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 3	(predict for XP_024457761.2)
nucl 6, cyto 3	(predict for XP_024457762.2)
nucl 6, cyto 3	(predict for XP_052309244.1)

Subcellular
localization
TargetP

other 8	(predict for XP_024457761.2)
other 7, chlo 4	(predict for XP_024457762.2)
other 8	(predict for XP_052309244.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7489727	ppo-r.4 for 7489727	ppo-m.4 for 7489727	gma-u.5 for 100777538	gma-u.5 for 100794305	mtr-u.5 for 120577419	ath-u.5 for AT5G66810	vvi-u.5 for 100244129	sly-u.5 for 101246489	osa-u.5 for 4348507	zma-u.5 for 100383390

Ortholog ID: 10424

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

bdi

Symbol

Function^*

uncharacterized LOC7489727

uncharacterized LOC100777538

uncharacterized LOC100794305

uncharacterized LOC120577419

Ran-binding protein in the microtubule-organising centre protein

uncharacterized LOC103829882

uncharacterized LOC100244129

uncharacterized LOC107909333

uncharacterized LOC107931623

uncharacterized LOC106358346

uncharacterized LOC106390359

uncharacterized LOC102628083

uncharacterized LOC101246489

uncharacterized LOC102581578

uncharacterized LOC107764759

uncharacterized LOC107794900

uncharacterized LOC4348507

uncharacterized LOC100383390

uncharacterized LOC123181102

uncharacterized LOC123046193

uncharacterized LOC123431427

uncharacterized LOC100845502

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	2
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	2
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2
nta03008	Ribosome biogenesis in eukaryotes	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	4
nta03040	Spliceosome	2
nta03008	Ribosome biogenesis in eukaryotes	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	8
tae00190	Oxidative phosphorylation	5
tae04145	Phagosome	5
tae00562	Inositol phosphate metabolism	4
tae00100	Steroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	8
tae00190	Oxidative phosphorylation	5
tae04145	Phagosome	5
tae00562	Inositol phosphate metabolism	4
tae00100	Steroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	4
bdi03040	Spliceosome	3
bdi03083	Polycomb repressive complex	2

Expression

Expression pattern

Entrez Gene ID^*

7489727

100777538

100794305

120577419

836814

103829882

100244129

107909333

107931623

106358346

106390359

102628083

101246489

102581578

107764759

107794900

4348507

100383390

123181102

123046193

123431427

100845502

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7489727 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7489727 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7489727 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7489727 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**