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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7489769   transcription factor bHLH74 
 ppo-r.4   7489769   transcription factor bHLH74 
 ppo-m.4   7489769   transcription factor bHLH74 
 ppo-u.5   7472635   transcription factor bHLH74 
 gma-u.5   100801930   transcription factor bHLH74 
 gma-u.5   100794464   transcription factor bHLH74 
 mtr-u.5   25482038   transcription factor bHLH74 
 ath-u.5   AT1G10120   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 vvi-u.5   100853160   transcription factor bHLH74 
 vvi-u.5   100247194   transcription factor bHLH74 
 sly-u.5   101251469   transcription factor bHLH74 
 osa-u.5   4333984   transcription factor bHLH74 
 zma-u.5   103625915   transcription factor bHLH49 
 zma-u.5   100193160   uncharacterized LOC100193160 

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Top 50 coexpressed genes to 7489769 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7489769 (ppo-u.5 coexpression data)

CoexMap"7489769"


ppoLOC7489769 | Entrez gene ID : 7489769    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (520 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1363 genes)  IEA  
Protein XP_002306505.1 [sequence] [blastp]
XP_024458141.1 [sequence] [blastp]
XP_024458142.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002306505.1)
nucl 10  (predict for XP_024458141.1)
nucl 10  (predict for XP_024458142.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_002306505.1)
other 8,  chlo 3  (predict for XP_024458141.1)
other 8,  chlo 3  (predict for XP_024458142.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7489769

.
ppo-r.4
for
7489769

.
ppo-m.4
for
7489769

.
ppo-u.5
for
7472635

.
gma-u.5
for
100801930

.
gma-u.5
for
100794464

.
mtr-u.5
for
25482038

.
ath-u.5
for
AT1G10120

.
vvi-u.5
for
100853160

.
vvi-u.5
for
100247194

.
sly-u.5
for
101251469

.
osa-u.5
for
4333984

.
zma-u.5
for
103625915

.
zma-u.5
for
100193160

.


Ortholog ID: 5401
Species ath sly osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G10120 LOC101251469 LOC4333984 LOC100193160 LOC103625915 LOC103871786 LOC103868118 LOC100247194 LOC100853160 LOC7489769 LOC7472635 LOC25482038 LOC123090950 LOC123087007 LOC123447648 LOC107938323 LOC107930605 LOC106350625 LOC106419828 LOC8059961 LOC102580436 LOC102609550 LOC100845245 LOC107809388 LOC107761914
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH74 transcription factor bHLH74 uncharacterized LOC100193160 transcription factor bHLH49 transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH49 transcription factor bHLH49 transcription factor bHLH49-like transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH49 transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH74 transcription factor bHLH74 uncharacterized LOC107761914
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837549 101251469 4333984 100193160 103625915 103871786 103868118 100247194 100853160 7489769 7472635 25482038 123090950 123087007 123447648 107938323 107930605 106350625 106419828 8059961 102580436 102609550 100845245 107809388 107761914
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