ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7490081	protein Dr1 homolog
ppo-r.4	7490081	protein Dr1 homolog
ppo-m.4	7490081	protein Dr1 homolog
ppo-u.5	18105691	protein Dr1 homolog
gma-u.5	DR1	class 2 transcription repressor NC2 beta 2
gma-u.5	100797580	class 2 transcription repressor NC2 beta 4
gma-u.5	100807912	class 2 transcription repressor NC2 beta 1
mtr-u.5	11443628	protein Dr1 homolog
mtr-u.5	25486801	protein Dr1 homolog
ath-u.5	NF-YB12	nuclear factor Y, subunit B12
ath-u.5	NF-YB13	nuclear factor Y, subunit B13
vvi-u.5	100242295	protein Dr1 homolog
sly-u.5	101265446	protein Dr1 homolog
sly-u.5	101244170	protein Dr1 homolog
osa-u.5	4345446	protein Dr1 homolog
zma-u.5	100191260	uncharacterized LOC100191260
zma-u.5	100274041	uncharacterized LOC100274041

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0046982 [list] [network] protein heterodimerization activity

(111 genes)

IEA

Protein

XP_002317921.1 [sequence] [blastp]
XP_024438577.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 4, chlo_mito 4	(predict for XP_002317921.1)
mito 4, chlo 3, nucl 2, cyto 1	(predict for XP_024438577.1)

Subcellular
localization
TargetP

other 9	(predict for XP_002317921.1)
other 8	(predict for XP_024438577.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7490081	ppo-r.4 for 7490081	ppo-m.4 for 7490081	ppo-u.5 for 18105691	gma-u.5 for DR1	gma-u.5 for 100797580	gma-u.5 for 100807912	mtr-u.5 for 11443628	mtr-u.5 for 25486801	ath-u.5 for NF-YB12	ath-u.5 for NF-YB13	vvi-u.5 for 100242295	sly-u.5 for 101265446	sly-u.5 for 101244170	osa-u.5 for 4345446	zma-u.5 for 100191260	zma-u.5 for 100274041

Ortholog

Ortholog ID: 4119

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

DR1

NF-YB13

NF-YB12

Function^*

protein Dr1 homolog

class 2 transcription repressor NC2 beta 2

class 2 transcription repressor NC2 beta 4

protein Dr1 homolog

nuclear factor Y, subunit B13

nuclear factor Y, subunit B12

protein Dr1 homolog

uncharacterized LOC100191260

uncharacterized LOC100274041

nuclear transcription factor Y subunit beta

protein Dr1 homolog

nuclear transcription factor Y subunit beta-like

protein Dr1 homolog

nuclear transcription factor Y subunit beta

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03020	RNA polymerase	2
bra03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04136	Autophagy - other	4
vvi03040	Spliceosome	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00760	Nicotinate and nicotinamide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	3
cit04136	Autophagy - other	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	10
nta04141	Protein processing in endoplasmic reticulum	6
nta03083	Polycomb repressive complex	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	7
nta03083	Polycomb repressive complex	5
nta04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	4
tae04148	Efferocytosis	3
tae04517	IgSF CAM signaling	3
tae04620	Toll-like receptor signaling pathway	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	2
bdi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	2
cre00190	Oxidative phosphorylation	2

Expression

Expression pattern

Entrez Gene ID^*

7490081

18105691

547635

100797580

11443628

25486801

832373

830715

103855765

103837349

100242295

107926602

107931510

106433879

106366058

102621947

101244170

101265446

102598701

102597292

107807263

107808072

4345446

100191260

100274041

542889

123072170

123445347

8070009

100835335

5717109

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7490081 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7490081 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	3	2	2	1	2	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7490081 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7490081 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**