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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7490724   uncharacterized LOC7490724 
 ppo-r.4   7490724   uncharacterized LOC7490724 
 ppo-u.5   7455020   uncharacterized LOC7455020 
 vvi-u.5   100266798   uncharacterized LOC100266798 
 sly-u.5   101243912   RING-variant domain-containing protein 
 osa-u.5   9266091   uncharacterized LOC9266091 
 zma-u.5   103626156   E3 ubiquitin-protein ligase MARCHF9 
 zma-u.5   100217225   RING/U-box superfamily protein 

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Top 50 coexpressed genes to 7490724 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7490724 (ppo-u.5 coexpression data)

CoexMap"7490724"


ppoLOC7490724 | Entrez gene ID : 7490724    
Species ppo vvi sly osa zma sbi nta mtr cre bra cit hvu bdi sot tae ath bna ghi gma
Paralog 3 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
Protein XP_002300525.2 [sequence] [blastp]
XP_024464117.1 [sequence] [blastp]
XP_024464126.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 1,  nucl 1,  vacu 1,  mito 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_002300525.2)
cyto 4,  nucl 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_024464117.1)
cyto 4,  chlo 1,  nucl 1,  vacu 1,  E.R. 1,  pero 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_024464126.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002300525.2)
other 8  (predict for XP_024464117.1)
other 8  (predict for XP_024464126.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7490724

.
ppo-r.4
for
7490724

.
ppo-u.5
for
7455020

.
vvi-u.5
for
100266798

.
sly-u.5
for
101243912

.
osa-u.5
for
9266091

.
zma-u.5
for
103626156

.
zma-u.5
for
100217225

.


Ortholog ID: 9442
Species sly osa zma zma bra vvi ppo ppo tae tae hvu ghi ghi bna bna sbi sot bdi nta nta
Symbol LOC101243912 LOC9266091 LOC100217225 LOC103626156 LOC103841616 LOC100266798 LOC7455020 LOC7490724 LOC123181096 LOC123121597 LOC123431370 LOC107950121 LOC121224360 LOC106368026 LOC106412064 LOC8070472 LOC102604307 LOC100845411 LOC107802645 LOC107770178
Function* RING-variant domain-containing protein uncharacterized LOC9266091 RING/U-box superfamily protein E3 ubiquitin-protein ligase MARCHF9 uncharacterized LOC103841616 uncharacterized LOC100266798 uncharacterized LOC7455020 uncharacterized LOC7490724 E3 ubiquitin-protein ligase MARCHF11 uncharacterized LOC123121597 E3 ubiquitin-protein ligase MARCHF9 E3 ubiquitin-protein ligase MARCHF2 E3 ubiquitin-protein ligase MARCHF2 uncharacterized LOC106368026 uncharacterized LOC106412064 uncharacterized LOC8070472 uncharacterized LOC102604307 uncharacterized LOC100845411 uncharacterized LOC107802645 uncharacterized LOC107770178
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 5
vvi04517 IgSF CAM signaling 5
vvi04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 7
ppo04145 Phagosome 4
ppo00190 Oxidative phosphorylation 3
ppo04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 3
hvu04075 Plant hormone signal transduction 3
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 4
ghi00071 Fatty acid degradation 2
ghi00230 Purine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00053 Ascorbate and aldarate metabolism 2
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00053 Ascorbate and aldarate metabolism 2
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 4
nta01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101243912 9266091 100217225 103626156 103841616 100266798 7455020 7490724 123181096 123121597 123431370 107950121 121224360 106368026 106412064 8070472 102604307 100845411 107802645 107770178
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