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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7490773   oxygen-evolving enhancer protein 3, chloroplastic 
 ppo-r.4   7490773   oxygen-evolving enhancer protein 3, chloroplastic 
 ppo-m.4   7490773   oxygen-evolving enhancer protein 3, chloroplastic 
 ppo-u.5   7495298   oxygen-evolving enhancer protein 3-2, chloroplastic 
 gma-u.5   100306034   uncharacterized LOC100306034 
 gma-u.5   100499794   uncharacterized LOC100499794 
 mtr-u.5   25499987   oxygen-evolving enhancer protein 3-2, chloroplastic 
 ath-u.5   PSBQ-2   photosystem II subunit Q-2 
 ath-u.5   PSBQA   photosystem II subunit QA 
 vvi-u.5   100240959   oxygen-evolving enhancer protein 3, chloroplastic 
 sly-u.5   PsbQ   photosystem II oxygen-evolving complex protein 3 
 osa-u.5   4343515   oxygen-evolving enhancer protein 3, chloroplastic-like 
 zma-u.5   103647735   oxygen-evolving enhancer protein 3-1, chloroplastic-like 
 zma-u.5   542279   oxygen-evolving enhancer protein 3-1, chloroplast 

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Top 50 coexpressed genes to 7490773 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7490773 (ppo-u.5 coexpression data)

CoexMap"7490773"


ppoLOC7490773 | Entrez gene ID : 7490773    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00195 [list] [network] Photosynthesis (104 genes)
GO BP
GO:0009767 [list] [network] photosynthetic electron transport chain  (26 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (119 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (22 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (39 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (49 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (301 genes)  IEA  
Protein XP_002305643.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002305643.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_002305643.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7490773

.
ppo-r.4
for
7490773

.
ppo-m.4
for
7490773

.
ppo-u.5
for
7495298

.
gma-u.5
for
100306034

.
gma-u.5
for
100499794

.
mtr-u.5
for
25499987

.
ath-u.5
for
PSBQ-2

.
ath-u.5
for
PSBQA

.
vvi-u.5
for
100240959

.
sly-u.5
for
PsbQ

.
osa-u.5
for
4343515

.
zma-u.5
for
103647735

.
zma-u.5
for
542279

.


Ortholog ID: 5784
Species ath ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit nta nta
Symbol PSBQ-2 PSBQA LOC100499794 LOC100306034 PsbQ LOC4343515 LOC542279 LOC103647735 LOC103839762 LOC103858917 LOC100240959 LOC7495298 LOC7490773 LOC25499987 LOC100049048 LOC123052491 LOC123425803 LOC107901779 LOC107905958 LOC106349077 LOC106440261 CHLRE_08g372450v5 LOC8081712 LOC102602034 LOC102620317 LOC107816469 LOC107767928
Function* photosystem II subunit Q-2 photosystem II subunit QA uncharacterized LOC100499794 uncharacterized LOC100306034 photosystem II oxygen-evolving complex protein 3 oxygen-evolving enhancer protein 3, chloroplastic-like oxygen-evolving enhancer protein 3-1, chloroplast oxygen-evolving enhancer protein 3-1, chloroplastic-like oxygen-evolving enhancer protein 3-2, chloroplastic oxygen-evolving enhancer protein 3-1, chloroplastic oxygen-evolving enhancer protein 3, chloroplastic oxygen-evolving enhancer protein 3-2, chloroplastic oxygen-evolving enhancer protein 3, chloroplastic oxygen-evolving enhancer protein 3-2, chloroplastic oxygen-evolving enhancer protein 3, chloroplastic oxygen-evolving enhancer protein 3, chloroplastic oxygen-evolving enhancer protein 3, chloroplastic-like oxygen-evolving enhancer protein 3, chloroplastic oxygen-evolving enhancer protein 3, chloroplastic oxygen-evolving enhancer protein 3-2, chloroplastic-like oxygen-evolving enhancer protein 3-1, chloroplastic-like uncharacterized protein oxygen-evolving enhancer protein 3-1, chloroplastic oxygen-evolving enhancer protein 3-2, chloroplastic oxygen-evolving enhancer protein 3, chloroplastic oxygen-evolving enhancer protein 3-2, chloroplastic-like oxygen-evolving enhancer protein 3-2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 15
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 13
sly00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 10
zma00196 Photosynthesis - antenna proteins 4
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 12
zma00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
bra00196 Photosynthesis - antenna proteins 2
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 9
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 8
ppo00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 11
hvu00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 12
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 5
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 5
cre00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 11
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 14
sot00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 10
nta00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 9
nta00196 Photosynthesis - antenna proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825866 827877 100499794 100306034 543931 4343515 542279 103647735 103839762 103858917 100240959 7495298 7490773 25499987 100049048 123052491 123425803 107901779 107905958 106349077 106440261 5726867 8081712 102602034 102620317 107816469 107767928
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