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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7493471   ribosome-binding factor PSRP1, chloroplastic 
 ppo-r.4   7493471   ribosome-binding factor PSRP1, chloroplastic 
 ppo-m.4   7493471   ribosome-binding factor PSRP1, chloroplastic 
 ppo-u.5   7464490   ribosome-binding factor PSRP1, chloroplastic 
 gma-u.5   100784915   30S ribosomal protein 1, chloroplastic-like 
 gma-u.5   100803327   ribosome-binding factor PSRP1, chloroplastic 
 mtr-u.5   11425207   ribosome-binding factor PSRP1, chloroplastic 
 ath-u.5   AT5G24490   30S ribosomal protein 
 vvi-u.5   100853929   ribosome-binding factor PSRP1, chloroplastic 
 sly-u.5   544268   chloroplast-specific ribosomal protein 
 osa-u.5   4334840   ribosome-binding factor PSRP1, chloroplastic 
 zma-u.5   100284918   ribosome-binding factor PSRP1, chloroplastic-like 

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Top 50 coexpressed genes to 7493471 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7493471 (ppo-u.5 coexpression data)

CoexMap"7493471"


ppoLOC7493471 | Entrez gene ID : 7493471    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045900 [list] [network] negative regulation of translational elongation  (10 genes)  IEA  
GO:0044238 [list] [network] primary metabolic process  (8158 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (109 genes)  IEA  
GO MF
GO:0043024 [list] [network] ribosomal small subunit binding  (13 genes)  IEA  
Protein XP_002317839.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_002317839.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002317839.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7493471

.
ppo-r.4
for
7493471

.
ppo-m.4
for
7493471

.
ppo-u.5
for
7464490

.
gma-u.5
for
100784915

.
gma-u.5
for
100803327

.
mtr-u.5
for
11425207

.
ath-u.5
for
AT5G24490

.
vvi-u.5
for
100853929

.
sly-u.5
for
544268

.
osa-u.5
for
4334840

.
zma-u.5
for
100284918

.


Ortholog ID: 8163
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G24490 LOC100784915 LOC100803327 LOC544268 LOC4334840 LOC100284918 LOC103837063 LOC100853929 LOC7464490 LOC11425207 LOC123087496 LOC123114441 LOC123399637 LOC107909453 LOC107948238 LOC125610010 LOC106428452 CHLRE_05g237450v5 LOC8061379 LOC102577471 LOC102613434 LOC100826703 LOC107819218 LOC107783393
Function* 30S ribosomal protein 30S ribosomal protein 1, chloroplastic-like ribosome-binding factor PSRP1, chloroplastic chloroplast-specific ribosomal protein ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic-like ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic-like ribosome-binding factor PSRP1, chloroplastic-like uncharacterized protein ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic ribosome-binding factor PSRP1, chloroplastic-like ribosome-binding factor PSRP1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00020 Citrate cycle (TCA cycle) 2
gma00260 Glycine, serine and threonine metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 2
sly00640 Propanoate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00071 Fatty acid degradation 2
cre00592 alpha-Linolenic acid metabolism 2
cre01212 Fatty acid metabolism 2
cre01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 3
bdi00380 Tryptophan metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832520 100784915 100803327 544268 4334840 100284918 103837063 100853929 7464490 11425207 123087496 123114441 123399637 107909453 107948238 125610010 106428452 5723294 8061379 102577471 102613434 100826703 107819218 107783393
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