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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7494056   NAD-dependent malic enzyme 59 kDa isoform, mitochondrial 
 ppo-r.4   7494056   NAD-dependent malic enzyme 59 kDa isoform, mitochondrial 
 ppo-u.5   7496944   NAD-dependent malic enzyme 59 kDa isoform, mitochondrial 
 ppo-u.5   7483786   NAD-dependent malic enzyme 62 kDa isoform, mitochondrial 
 ppo-u.5   18105029   NAD-dependent malic enzyme 62 kDa isoform, mitochondrial 
 gma-u.5   100811081   NAD-dependent malic enzyme 2, mitochondrial 
 gma-u.5   100806545   NAD-dependent malic enzyme 59 kDa isoform, mitochondrial 
 gma-u.5   100799344   NAD-dependent malic enzyme 1, mitochondrial 
 mtr-u.5   11446923   NAD-dependent malic enzyme 2, mitochondrial 
 mtr-u.5   11433166   NAD-dependent malic enzyme 59 kDa isoform, mitochondrial 
 mtr-u.5   11420682   NAD-dependent malic enzyme 62 kDa isoform, mitochondrial 
 ath-u.5   NAD-ME1   NAD-dependent malic enzyme 1 
 ath-u.5   NAD-ME2   NAD-dependent malic enzyme 2 
 vvi-u.5   100241371   NAD-dependent malic enzyme 59 kDa isoform, mitochondrial 
 vvi-u.5   100261633   NAD-dependent malic enzyme 62 kDa isoform, mitochondrial 
 sly-u.5   101246962   NAD-dependent malic enzyme 59 kDa isoform, mitochondrial 
 sly-u.5   101246159   NAD-dependent malic enzyme 62 kDa isoform, mitochondrial 
 osa-u.5   4343294   NAD-dependent malic enzyme 62 kDa isoform, mitochondrial 
 osa-u.5   4349051   NAD-dependent malic enzyme 59 kDa isoform, mitochondrial 
 zma-u.5   100501486   Malic enzyme 
 zma-u.5   100191942   uncharacterized LOC100191942 

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Top 50 coexpressed genes to 7494056 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494056 (ppo-u.5 coexpression data)

CoexMap"7494056"


ppoLOC7494056 | Entrez gene ID : 7494056    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 3 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00620 [list] [network] Pyruvate metabolism (136 genes)
pop00710 [list] [network] Carbon fixation by Calvin cycle (101 genes)
pop01200 [list] [network] Carbon metabolism (347 genes)
GO BP
GO:0006108 [list] [network] malate metabolic process  (25 genes)  IEA  
GO:0006090 [list] [network] pyruvate metabolic process  (90 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
GO:0004471 [list] [network] malate dehydrogenase (decarboxylating) (NAD+) activity  (9 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (105 genes)  IEA  
Protein XP_024450045.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  cyto_mito 4,  chlo 3  (predict for XP_024450045.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_024450045.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7494056

.
ppo-r.4
for
7494056

.
ppo-u.5
for
7496944

.
ppo-u.5
for
7483786

.
ppo-u.5
for
18105029

.
gma-u.5
for
100811081

.
gma-u.5
for
100806545

.
gma-u.5
for
100799344

.
mtr-u.5
for
11446923

.
mtr-u.5
for
11433166

.
mtr-u.5
for
11420682

.
ath-u.5
for
NAD-ME1

.
ath-u.5
for
NAD-ME2

.
vvi-u.5
for
100241371

.
vvi-u.5
for
100261633

.
sly-u.5
for
101246962

.
sly-u.5
for
101246159

.
osa-u.5
for
4343294

.
osa-u.5
for
4349051

.
zma-u.5
for
100501486

.
zma-u.5
for
100191942

.


Ortholog ID: 2609
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol NAD-ME2 NAD-ME1 LOC100811081 LOC100799344 LOC101246159 LOC101246962 LOC4349051 LOC4343294 LOC100191942 LOC100501486 LOC103858863 LOC103837635 LOC100261633 LOC100241371 LOC7483786 LOC7494056 LOC11420682 LOC11446923 LOC123052611 LOC123188587 LOC123433416 LOC123426021 LOC107957250 LOC107960344 LOC106365524 LOC106434956 CHLRE_06g268750v5 LOC8067080 LOC8077468 LOC102581802 NAD-ME LOC127901471 LOC102578068 LOC100844092 LOC100838567 LOC107806354 LOC107805341
Function* NAD-dependent malic enzyme 2 NAD-dependent malic enzyme 1 NAD-dependent malic enzyme 2, mitochondrial NAD-dependent malic enzyme 1, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial NAD-dependent malic enzyme 59 kDa isoform, mitochondrial NAD-dependent malic enzyme 59 kDa isoform, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial uncharacterized LOC100191942 Malic enzyme NAD-dependent malic enzyme 2, mitochondrial NAD-dependent malic enzyme 1, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial NAD-dependent malic enzyme 59 kDa isoform, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial NAD-dependent malic enzyme 59 kDa isoform, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial NAD-dependent malic enzyme 2, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial NAD-dependent malic enzyme 59 kDa isoform, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial NAD-dependent malic enzyme 59 kDa isoform, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial NAD-dependent malic enzyme 2, mitochondrial NAD-dependent malic enzyme 2, mitochondrial uncharacterized protein NAD-dependent malic enzyme 59 kDa isoform, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like NAD-dependent malic enzyme 62 kDa isoform, mitochondrial-like NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like NAD-dependent malic enzyme 59 kDa isoform, mitochondrial NAD-dependent malic enzyme 59 kDa isoform, mitochondrial NAD-dependent malic enzyme 62 kDa isoform, mitochondrial NAD-dependent malic enzyme, mitochondrial NAD-dependent malic enzyme 59 kDa isoform, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00020 Citrate cycle (TCA cycle) 4
ath00785 Lipoic acid metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 10
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 8
gma00620 Pyruvate metabolism 6
gma00010 Glycolysis / Gluconeogenesis 3
gma00061 Fatty acid biosynthesis 3
gma00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 11
gma04145 Phagosome 7
gma04142 Lysosome 4
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
sly04145 Phagosome 5
sly04142 Lysosome 3
sly00620 Pyruvate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 7
sly00190 Oxidative phosphorylation 5
sly04145 Phagosome 5
sly00020 Citrate cycle (TCA cycle) 4
sly04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 4
osa00620 Pyruvate metabolism 3
osa00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 3
osa01200 Carbon metabolism 3
osa00620 Pyruvate metabolism 3
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma04144 Endocytosis 2
zma00620 Pyruvate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 4
bra04145 Phagosome 3
bra04517 IgSF CAM signaling 3
bra04144 Endocytosis 2
bra00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 5
bra04142 Lysosome 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00071 Fatty acid degradation 3
vvi01212 Fatty acid metabolism 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo00620 Pyruvate metabolism 3
ppo01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo01230 Biosynthesis of amino acids 5
ppo00710 Carbon fixation by Calvin cycle 3
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr00071 Fatty acid degradation 2
mtr01212 Fatty acid metabolism 2
mtr04146 Peroxisome 2
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 6
tae00710 Carbon fixation by Calvin cycle 6
tae01200 Carbon metabolism 6
tae00071 Fatty acid degradation 3
tae00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 6
tae00710 Carbon fixation by Calvin cycle 6
tae01200 Carbon metabolism 6
tae00511 Other glycan degradation 3
tae00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
ghi00480 Glutathione metabolism 3
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 3
cre00630 Glyoxylate and dicarboxylate metabolism 2
cre01232 Nucleotide metabolism 2
cre00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot04120 Ubiquitin mediated proteolysis 3
sot00020 Citrate cycle (TCA cycle) 2
sot00620 Pyruvate metabolism 2
sot01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot00190 Oxidative phosphorylation 2
sot04145 Phagosome 2
sot03050 Proteasome 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 3
cit00710 Carbon fixation by Calvin cycle 3
cit01200 Carbon metabolism 3
cit00620 Pyruvate metabolism 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 3
cit00710 Carbon fixation by Calvin cycle 3
cit01200 Carbon metabolism 3
cit00620 Pyruvate metabolism 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 11
bdi00020 Citrate cycle (TCA cycle) 6
bdi01210 2-Oxocarboxylic acid metabolism 5
bdi01230 Biosynthesis of amino acids 5
bdi00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 7
bdi01200 Carbon metabolism 6
bdi01230 Biosynthesis of amino acids 4
bdi00020 Citrate cycle (TCA cycle) 3
bdi01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 4
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 10
nta01210 2-Oxocarboxylic acid metabolism 8
nta00020 Citrate cycle (TCA cycle) 6
nta00785 Lipoic acid metabolism 6
nta00310 Lysine degradation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828222 815842 100811081 100799344 101246159 101246962 4349051 4343294 100191942 100501486 103858863 103837635 100261633 100241371 7483786 7494056 11420682 11446923 123052611 123188587 123433416 123426021 107957250 107960344 106365524 106434956 5721886 8067080 8077468 102581802 102598070 127901471 102578068 100844092 100838567 107806354 107805341
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