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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7494346   secretory carrier-associated membrane protein 3-like 
 ppo-u.5   7465159   secretory carrier-associated membrane protein 4 
 ppo-u.5   18094097   secretory carrier-associated membrane protein 4 
 ppo-u.5   18108591   secretory carrier-associated membrane protein 1 
 gma-u.5   100815455   putative secretory carrier-associated membrane protein 1-like 
 gma-u.5   100814913   secretory carrier-associated membrane protein 1 
 mtr-u.5   11416952   secretory carrier-associated membrane protein 4 
 mtr-u.5   25492086   secretory carrier-associated membrane protein 1 
 ath-u.5   SCAMP3   Secretory carrier membrane protein (SCAMP) family protein 
 ath-u.5   SCAMP2   Secretory carrier membrane protein (SCAMP) family protein 
 ath-u.5   SCAMP4   Secretory carrier membrane protein (SCAMP) family protein 
 vvi-u.5   100243027   secretory carrier-associated membrane protein 1 
 vvi-u.5   100262642   secretory carrier-associated membrane protein 4 
 vvi-u.5   100255491   secretory carrier-associated membrane protein 3 
 sly-u.5   101244619   secretory carrier-associated membrane protein 3 
 sly-u.5   101258790   secretory carrier-associated membrane protein 2-like 
 sly-u.5   101259455   secretory carrier-associated membrane protein 1 
 osa-u.5   9266378   secretory carrier-associated membrane protein 5-like 
 zma-u.5   100284090   SC3 protein 
 zma-u.5   100284626   uncharacterized LOC100284626 
 zma-u.5   100285595   uncharacterized LOC100285595 

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Top 50 coexpressed genes to 7494346 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494346 (ppo-m.4 coexpression data)

CoexMap"7494346"


ppoLOC7494346 | Entrez gene ID : 7494346    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 2 3 3 3 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015031 [list] [network] protein transport  (471 genes)  IEA  
GO CC
GO:0055038 [list] [network] recycling endosome membrane  (7 genes)  IEA  
GO:0032588 [list] [network] trans-Golgi network membrane  (8 genes)  IEA  
GO MF
Protein XP_052308220.1 [sequence] [blastp]
XP_052308221.1 [sequence] [blastp]
XP_052308222.1 [sequence] [blastp]
XP_052308223.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 9  (predict for XP_052308220.1)
plas 9  (predict for XP_052308221.1)
plas 9  (predict for XP_052308222.1)
plas 9,  E.R. 1  (predict for XP_052308223.1)
Subcellular
localization
TargetP
other 8  (predict for XP_052308220.1)
other 8  (predict for XP_052308221.1)
other 8  (predict for XP_052308222.1)
chlo 6,  other 5  (predict for XP_052308223.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7494346

.
ppo-u.5
for
7465159

.
ppo-u.5
for
18094097

.
ppo-u.5
for
18108591

.
gma-u.5
for
100815455

.
gma-u.5
for
100814913

.
mtr-u.5
for
11416952

.
mtr-u.5
for
25492086

.
ath-u.5
for
SCAMP3

.
ath-u.5
for
SCAMP2

.
ath-u.5
for
SCAMP4

.
vvi-u.5
for
100243027

.
vvi-u.5
for
100262642

.
vvi-u.5
for
100255491

.
sly-u.5
for
101244619

.
sly-u.5
for
101258790

.
sly-u.5
for
101259455

.
osa-u.5
for
9266378

.
zma-u.5
for
100284090

.
zma-u.5
for
100284626

.
zma-u.5
for
100285595

.


Ortholog ID: 298
Species ath ath gma gma sly sly osa zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol SCAMP2 SCAMP4 LOC100796729 LOC100814913 LOC101258790 LOC101260101 LOC4333331 LOC100303986 LOC103833680 LOC100255491 LOC100243027 LOC18094097 LOC7485580 LOC25492086 LOC11416952 LOC123128078 LOC123188244 LOC123399173 LOC123404303 LOC107913984 LOC106451739 LOC106396705 CHLRE_02g089900v5 LOC110434321 LOC102604300 LOC102591813 LOC102612432 LOC100822024 LOC107799639 LOC107812192
Function* Secretory carrier membrane protein (SCAMP) family protein Secretory carrier membrane protein (SCAMP) family protein secretory carrier-associated membrane protein secretory carrier-associated membrane protein 1 secretory carrier-associated membrane protein 2-like secretory carrier-associated membrane protein 2 secretory carrier-associated membrane protein 4-like SC3 protein secretory carrier-associated membrane protein 4 secretory carrier-associated membrane protein 3 secretory carrier-associated membrane protein 1 secretory carrier-associated membrane protein 4 secretory carrier-associated membrane protein 3 secretory carrier-associated membrane protein 1 secretory carrier-associated membrane protein 4 secretory carrier-associated membrane protein 5 secretory carrier-associated membrane protein 1 secretory carrier-associated membrane protein 4 secretory carrier-associated membrane protein 5-like secretory carrier-associated membrane protein 3 secretory carrier-associated membrane protein 4 secretory carrier-associated membrane protein 3 uncharacterized protein secretory carrier-associated membrane protein 5 secretory carrier-associated membrane protein 1-like secretory carrier-associated membrane protein 4 secretory carrier-associated membrane protein 4 secretory carrier-associated membrane protein 3 secretory carrier-associated membrane protein 1-like secretory carrier-associated membrane protein 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 5
ath00640 Propanoate metabolism 4
ath01200 Carbon metabolism 3
ath00785 Lipoic acid metabolism 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi04130 SNARE interactions in vesicular transport 3
vvi03250 Viral life cycle - HIV-1 2
vvi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 7
ppo00520 Amino sugar and nucleotide sugar metabolism 5
ppo01250 Biosynthesis of nucleotide sugars 5
ppo00541 Biosynthesis of various nucleotide sugars 4
ppo00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 3
mtr03250 Viral life cycle - HIV-1 3
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 5
mtr04517 IgSF CAM signaling 5
mtr04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 6
tae01250 Biosynthesis of nucleotide sugars 6
tae00040 Pentose and glucuronate interconversions 2
tae00053 Ascorbate and aldarate metabolism 2
tae00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00514 Other types of O-glycan biosynthesis 3
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01250 Biosynthesis of nucleotide sugars 4
hvu00520 Amino sugar and nucleotide sugar metabolism 3
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 11
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00541 Biosynthesis of various nucleotide sugars 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit00190 Oxidative phosphorylation 3
cit04145 Phagosome 2
cit04144 Endocytosis 2
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 2
bdi04517 IgSF CAM signaling 2
bdi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837659 839464 100796729 100814913 101258790 101260101 4333331 100303986 103833680 100255491 100243027 18094097 7485580 25492086 11416952 123128078 123188244 123399173 123404303 107913984 106451739 106396705 5727459 110434321 102604300 102591813 102612432 100822024 107799639 107812192
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