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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7494560   ultraviolet-B receptor UVR8 
 ppo-r.4   7494560   ultraviolet-B receptor UVR8 
 ppo-m.4   7494560   ultraviolet-B receptor UVR8 
 ppo-u.5   18107392   ultraviolet-B receptor UVR8 
 gma-u.5   100779559   ultraviolet-B receptor UVR8 
 mtr-u.5   25479730   ultraviolet-B receptor UVR8 
 ath-u.5   AT3G02510   Regulator of chromosome condensation (RCC1) family protein 
 ath-u.5   AT5G16040   Regulator of chromosome condensation (RCC1) family protein 
 vvi-u.5   100265192   ultraviolet-B receptor UVR8 
 sly-u.5   101247678   ultraviolet-B receptor UVR8 
 osa-u.5   4345636   ultraviolet-B receptor UVR8 
 zma-u.5   100273073   putative regulator of chromosome condensation (RCC1) family protein 
 zma-u.5   100273996   uncharacterized LOC100273996 

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Top 50 coexpressed genes to 7494560 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494560 (ppo-u.5 coexpression data)

CoexMap"7494560"


ppoLOC7494560 | Entrez gene ID : 7494560    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002305965.2 [sequence] [blastp]
XP_024454667.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  cysk 2  (predict for XP_002305965.2)
cysk 5,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_024454667.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002305965.2)
other 9  (predict for XP_024454667.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7494560

.
ppo-r.4
for
7494560

.
ppo-m.4
for
7494560

.
ppo-u.5
for
18107392

.
gma-u.5
for
100779559

.
mtr-u.5
for
25479730

.
ath-u.5
for
AT3G02510

.
ath-u.5
for
AT5G16040

.
vvi-u.5
for
100265192

.
sly-u.5
for
101247678

.
osa-u.5
for
4345636

.
zma-u.5
for
100273073

.
zma-u.5
for
100273996

.


Ortholog ID: 7575
Species ath ath gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G02510 AT5G16040 LOC100779559 LOC101247678 LOC4345636 LOC100273996 LOC100273073 LOC103843333 LOC117130855 LOC100265192 LOC18107392 LOC7494560 LOC25479730 LOC123155462 LOC123154285 LOC123407124 LOC107912719 LOC107916673 LOC106364421 LOC106387291 LOC110437171 LOC102578177 LOC102618063 LOC100824414 LOC107782456 LOC107768388
Function* Regulator of chromosome condensation (RCC1) family protein Regulator of chromosome condensation (RCC1) family protein ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 uncharacterized LOC100273996 putative regulator of chromosome condensation (RCC1) family protein ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 3
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03018 RNA degradation 3
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 4
osa01232 Nucleotide metabolism 2
osa01240 Biosynthesis of cofactors 2
osa00770 Pantothenate and CoA biosynthesis 2
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00290 Valine, leucine and isoleucine biosynthesis 4
zma00650 Butanoate metabolism 4
zma00660 C5-Branched dibasic acid metabolism 4
zma00770 Pantothenate and CoA biosynthesis 4
zma01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 5
ghi03420 Nucleotide excision repair 5
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 5
ghi03420 Nucleotide excision repair 5
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit00900 Terpenoid backbone biosynthesis 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 5
bdi00010 Glycolysis / Gluconeogenesis 4
bdi00710 Carbon fixation by Calvin cycle 4
bdi01200 Carbon metabolism 4
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 8
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04122 Sulfur relay system 2
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821100 831461 100779559 101247678 4345636 100273996 100273073 103843333 117130855 100265192 18107392 7494560 25479730 123155462 123154285 123407124 107912719 107916673 106364421 106387291 110437171 102578177 102618063 100824414 107782456 107768388
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