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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5  7494666  putative pentatricopeptide repeat-containing protein At5g43820 
 ppo-r.4  7494666  putative pentatricopeptide repeat-containing protein At5g43820 
 ppo-m.4  7494666  putative pentatricopeptide repeat-containing protein At5g43820 
 gma-u.5  100806557  putative pentatricopeptide repeat-containing protein At5g43820 
 mtr-u.5  11423277  putative pentatricopeptide repeat-containing protein At5g43820 
 sly-u.5  101250272  putative pentatricopeptide repeat-containing protein At5g43820 
 osa-u.5  4329106  putative pentatricopeptide repeat-containing protein At5g43820 
 zma-u.5  100381451  Putative pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 7494666 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494666 (ppo-u.5 coexpression data)

CoexMap"7494666"


ppoLOC7494666 | Entrez gene ID : 7494666
Species ppo gma mtr sly osa zma sbi nta bra cre vvi cit hvu bdi sot tae ath bna ghi
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024456055.2 [sequence] [blastp]
XP_024456056.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_024456055.2)
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_024456056.2)
Subcellular
localization
TargetP
chlo 3,  mito 3  (predict for XP_024456055.2)
chlo 3,  mito 3  (predict for XP_024456056.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-u.5
for
7494666

.

ppo-r.4
for
7494666

.

ppo-m.4
for
7494666

.

gma-u.5
for
100806557

.

mtr-u.5
for
11423277

.

sly-u.5
for
101250272

.

osa-u.5
for
4329106

.

zma-u.5
for
100381451

.


Ortholog ID: 12238
Species gma sly osa zma ppo mtr tae tae hvu ghi ghi bna bna cit bdi nta nta
Symbol LOC100806557 LOC101250272 LOC4329106 LOC100381451 LOC7494666 LOC11423277 LOC123105619 LOC123123441 LOC123452978 LOC107905718 LOC107905757 LOC106407195 LOC106427513 LOC102621369 LOC100831963 LOC107823885 LOC107789295
Function* putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 Putative pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 putative pentatricopeptide repeat-containing protein At5g43820 uncharacterized LOC107823885 uncharacterized LOC107789295
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100806557 101250272 4329106 100381451 7494666 11423277 123105619 123123441 123452978 107905718 107905757 106407195 106427513 102621369 100831963 107823885 107789295
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