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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7495744   pentatricopeptide repeat-containing protein At5g11310, mitochondrial 
 ppo-r.4   7495744   pentatricopeptide repeat-containing protein At5g11310, mitochondrial 
 ppo-m.4   7495744   pentatricopeptide repeat-containing protein At5g11310, mitochondrial 
 gma-u.5   100793484   pentatricopeptide repeat-containing protein At5g11310, mitochondrial 
 mtr-u.5   11434210   pentatricopeptide repeat-containing protein At5g11310, mitochondrial 
 ath-u.5   AT5G11310   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100257656   pentatricopeptide repeat-containing protein At5g11310, mitochondrial 
 sly-u.5   101247335   pentatricopeptide repeat-containing protein At5g11310, mitochondrial 
 osa-u.5   4324039   pentatricopeptide repeat-containing protein At5g11310, mitochondrial 
 zma-u.5   100274557   uncharacterized LOC100274557 

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Top 50 coexpressed genes to 7495744 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7495744 (ppo-u.5 coexpression data)

CoexMap"7495744"


ppoLOC7495744 | Entrez gene ID : 7495744    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002308636.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  plas 1,  E.R. 1,  pero 1,  cyto_mito 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_002308636.1)
Subcellular
localization
TargetP
chlo 2  (predict for XP_002308636.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7495744

.
ppo-r.4
for
7495744

.
ppo-m.4
for
7495744

.
gma-u.5
for
100793484

.
mtr-u.5
for
11434210

.
ath-u.5
for
AT5G11310

.
vvi-u.5
for
100257656

.
sly-u.5
for
101247335

.
osa-u.5
for
4324039

.
zma-u.5
for
100274557

.


Ortholog ID: 9650
Species ath gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G11310 LOC100793484 LOC101247335 LOC4324039 LOC100274557 LOC103846732 LOC100257656 LOC7495744 LOC11434210 LOC123110421 LOC123395440 LOC121230389 LOC107951971 LOC106391322 LOC106372418 LOC8065561 LOC102599290 LOC102606646 LOC112268496 LOC107801177 LOC107769237
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial uncharacterized LOC100274557 pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial glutathione S-transferase zeta class pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial-like pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial pentatricopeptide repeat-containing protein At5g11310, mitochondrial-like uncharacterized LOC107801177 uncharacterized LOC107769237
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
zma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 4
tae00902 Monoterpenoid biosynthesis 2
tae00940 Phenylpropanoid biosynthesis 2
tae00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831002 100793484 101247335 4324039 100274557 103846732 100257656 7495744 11434210 123110421 123395440 121230389 107951971 106391322 106372418 8065561 102599290 102606646 112268496 107801177 107769237
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