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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4  7495828  pentatricopeptide repeat-containing protein At3g26782, mitochondrial 
 gma-u.5  100817006  putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 
 gma-u.5  102661399  pentatricopeptide repeat-containing protein At3g26782, mitochondrial 
 mtr-u.5  11429114  pentatricopeptide repeat-containing protein At3g26782, mitochondrial 
 ath-u.5  AT3G26782  Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5  100251597  pentatricopeptide repeat-containing protein At3g26782, mitochondrial 
 sly-u.5  101260791  pentatricopeptide repeat-containing protein At3g26782, mitochondrial 
 osa-u.5  4342977  pentatricopeptide repeat-containing protein At3g26782, mitochondrial 
 zma-u.5  103647190  pentatricopeptide repeat-containing protein At3g26782, mitochondrial 

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Top 50 coexpressed genes to 7495828 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7495828 (ppo-m.4 coexpression data)

CoexMap"7495828"


ppoLOC7495828 | Entrez gene ID : 7495828
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002300144.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 3,  chlo_mito 3  (predict for XP_002300144.2)
Subcellular
localization
TargetP
scret 4,  other 3  (predict for XP_002300144.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-m.4
for
7495828

.

gma-u.5
for
100817006

.

gma-u.5
for
102661399

.

mtr-u.5
for
11429114

.

ath-u.5
for
AT3G26782

.

vvi-u.5
for
100251597

.

sly-u.5
for
101260791

.

osa-u.5
for
4342977

.

zma-u.5
for
103647190

.


Ortholog ID: 10569
Species ath gma gma sly osa zma bra vvi mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G26782 LOC102661399 LOC100817006 LOC101260791 LOC4342977 LOC103647190 LOC103846272 LOC100251597 LOC11429114 LOC123091480 LOC123096445 LOC123448033 LOC107948559 LOC107948507 LOC106360368 LOC106415070 LOC8057313 LOC102588285 LOC102619167 LOC100845205 LOC107779608 LOC107811805
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g26782, mitochondrial putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like pentatricopeptide repeat-containing protein At3g26782, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5008030 102661399 100817006 101260791 4342977 103647190 103846272 100251597 11429114 123091480 123096445 123448033 107948559 107948507 106360368 106415070 8057313 102588285 102619167 100845205 107779608 107811805
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