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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7495969   60S ribosomal protein L34 
 ppo-r.4   7495969   60S ribosomal protein L34 
 ppo-u.5   7484340   60S ribosomal protein L34 
 ppo-u.5   18105866   60S ribosomal protein L34 
 ppo-u.5   112326175   60S ribosomal protein L34 
 gma-u.5   100305798   uncharacterized LOC100305798 
 gma-u.5   100499931   uncharacterized LOC100499931 
 gma-u.5   100499882   uncharacterized LOC100499882 
 mtr-u.5   25502702   60S ribosomal protein L34 
 mtr-u.5   11408889   60S ribosomal protein L34 
 mtr-u.5   11429919   60S ribosomal protein L34 
 ath-u.5   AT3G28900   Ribosomal protein L34e superfamily protein 
 ath-u.5   AT1G26880   Ribosomal protein L34e superfamily protein 
 ath-u.5   RPL34   ribosomal protein L34 
 vvi-u.5   100241433   large ribosomal subunit protein eL34 
 vvi-u.5   100252617   large ribosomal subunit protein eL34 
 sly-u.5   101254152   large ribosomal subunit protein eL34 
 sly-u.5   101266720   large ribosomal subunit protein eL34 
 sly-u.5   101253597   large ribosomal subunit protein eL34 
 osa-u.5   9267671   large ribosomal subunit protein eL34 
 osa-u.5   4345669   large ribosomal subunit protein eL34 
 osa-u.5   4344696   large ribosomal subunit protein eL34 
 zma-u.5   100286075   60S ribosomal protein L34 
 zma-u.5   100193910   60S ribosomal protein L34 
 zma-u.5   100217171   60S ribosomal protein L34 

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Top 50 coexpressed genes to 7495969 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7495969 (ppo-u.5 coexpression data)

CoexMap"7495969"


ppoLOC7495969 | Entrez gene ID : 7495969    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0042254 [list] [network] ribosome biogenesis  (342 genes)  IEA  
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (171 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002324052.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  mito 1  (predict for XP_002324052.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002324052.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7495969

.
ppo-r.4
for
7495969

.
ppo-u.5
for
7484340

.
ppo-u.5
for
18105866

.
ppo-u.5
for
112326175

.
gma-u.5
for
100305798

.
gma-u.5
for
100499931

.
gma-u.5
for
100499882

.
mtr-u.5
for
25502702

.
mtr-u.5
for
11408889

.
mtr-u.5
for
11429919

.
ath-u.5
for
AT3G28900

.
ath-u.5
for
AT1G26880

.
ath-u.5
for
RPL34

.
vvi-u.5
for
100241433

.
vvi-u.5
for
100252617

.
sly-u.5
for
101254152

.
sly-u.5
for
101266720

.
sly-u.5
for
101253597

.
osa-u.5
for
9267671

.
osa-u.5
for
4345669

.
osa-u.5
for
4344696

.
zma-u.5
for
100286075

.
zma-u.5
for
100193910

.
zma-u.5
for
100217171

.


Ortholog ID: 1111
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol RPL34 AT1G26880 LOC100305798 LOC100785061 LOC101254152 LOC101266720 LOC4345669 LOC4344696 LOC100217171 LOC100193910 LOC103831364 LOC100241433 LOC100252617 LOC18105866 LOC112326175 LOC11429919 LOC25502702 LOC123165465 LOC123045663 LOC123426913 LOC123398291 LOC107886864 LOC107946513 LOC106379530 LOC106402071 CHLRE_16g661050v5 LOC8077830 LOC8076595 LOC102605171 LOC102618065 LOC100840028 LOC107771505 LOC107768952
Function* ribosomal protein L34 Ribosomal protein L34e superfamily protein uncharacterized LOC100305798 60S ribosomal protein L34 large ribosomal subunit protein eL34 large ribosomal subunit protein eL34 large ribosomal subunit protein eL34 large ribosomal subunit protein eL34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34-2 large ribosomal subunit protein eL34 large ribosomal subunit protein eL34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34-1 60S ribosomal protein L34-2-like ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34 60S ribosomal protein L34-like 60S ribosomal protein L34 60S ribosomal protein L34 large ribosomal subunit protein eL34-like large ribosomal subunit protein eL34-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03420 Nucleotide excision repair 3
nta03040 Spliceosome 3
nta03010 Ribosome 3
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843298 838331 100305798 100785061 101254152 101266720 4345669 4344696 100217171 100193910 103831364 100241433 100252617 18105866 112326175 11429919 25502702 123165465 123045663 123426913 123398291 107886864 107946513 106379530 106402071 5723498 8077830 8076595 102605171 102618065 100840028 107771505 107768952
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